DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and stom

DIOPT Version :9

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_017208322.1 Gene:stom / 81534 ZFINID:ZDB-GENE-980526-486 Length:305 Species:Danio rerio


Alignment Length:253 Identity:160/253 - (63%)
Similarity:214/253 - (84%) Gaps:1/253 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GCMEWVVTLFSVLIFIITSPIAIFICFKVVAEYERAIIFRLGR-LSGGARGPGMFFILPCIDEYR 126
            |...|::.:||:|:.::|.|::|::|.|:|.|||||||||||| |.|||:|||:||||||.|.:.
Zfish    51 GLCGWILVIFSILLTLLTLPLSIWMCIKIVKEYERAIIFRLGRILRGGAKGPGLFFILPCTDSFI 115

  Fly   127 KVDLRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGT 191
            .||:||:||::|.||:||||||||:||.|||||:.:...||..:.:...:|||||.|||||::||
Zfish   116 NVDMRTITFDIPPQEVLTKDSVTVSVDGVVYYRVQNATLAVANITNADAATRLLAQTTLRNVLGT 180

  Fly   192 RNLSELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRAMAAEAEAARDARAKVI 256
            :||:|:|::||.:||:||:|||:||:.||:.|||||||||.||:.:||||||||||:|:||||||
Zfish   181 KNLAEILSDREEIAHSMQSTLDDATDDWGIKVERVEIKDVKLPLQLQRAMAAEAEASREARAKVI 245

  Fly   257 AAEGEKKSATALKEASDVISASPSALQLRYLQTLSSISAEKNSTIIFPLPMELLTPYL 314
            |||||..::.||||||.||:.|||||||||||||::|:||||||||||||::::..:|
Zfish   246 AAEGEMNASRALKEASLVIAESPSALQLRYLQTLNTIAAEKNSTIIFPLPIDMMQSFL 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 PHB 88..238 CDD:214581 95/150 (63%)
SPFH_like 107..314 CDD:302763 135/206 (66%)
stomXP_017208322.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9274
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54926
OrthoDB 1 1.010 - - D1062075at2759
OrthoFinder 1 1.000 - - FOG0000760
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100539
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.690

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