DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and stoml1

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001039193.1 Gene:stoml1 / 734047 XenbaseID:XB-GENE-990189 Length:361 Species:Xenopus tropicalis


Alignment Length:52 Identity:12/52 - (23%)
Similarity:17/52 - (32%) Gaps:19/52 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PSGTSCNYPANLITNQPPFLPDSDRITGKTE--KKP-------EKKSEENTC 47
            |....|.:..:.:||          :.||..  |.|       |.|:...||
 Frog   116 PLCRKCKFCLSPLTN----------LCGKISNLKSPASDQQLMEDKTSRFTC 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137
stoml1NP_001039193.1 SPFH_SLP-1 75..205 CDD:259814 12/52 (23%)
SCP2 254..359 CDD:442486
Blue background indicates that the domain is not in the aligned region.

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