DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and Stoml1

DIOPT Version :9

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_081218.3 Gene:Stoml1 / 69106 MGIID:1916356 Length:399 Species:Mus musculus


Alignment Length:252 Identity:76/252 - (30%)
Similarity:130/252 - (51%) Gaps:19/252 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 MAPEPALRVPGTTQQYRGFKTSENEPKGCMEWVVTLFSVLIFIITSPIAIFICFKVVAEYERAII 100
            ::|||....||.       ...|:.|......:|::...|:.::|.||:.:...|:|..|||.|:
Mouse    33 LSPEPGSVGPGA-------DAPESWPSCLCHGLVSVLGFLLLLLTFPISGWFALKIVPTYERMIV 90

  Fly   101 FRLGRLSGGARGPGMFFILPCIDEYRKVDLRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLY 165
            |||||:. ..:||||..:||.||.:::|||||..||||..::.:||...::|.|.|.:||.||:.
Mouse    91 FRLGRIR-NPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVL 154

  Fly   166 AVIQVEDYSMSTRLLAATTLRNIVGTRNLSELLTERETLAHNMQATLDEATEPWGVMVERVEIKD 230
            :|:.|:|.:.:||:.|...:...:..|.|.|:..|:..:...:...:::.|..||:.|:|||:  
Mouse   155 SVMAVKDLNTATRMTAHNAMTKALLRRPLQEIQMEKLKIGDQLLLEINDVTRAWGLEVDRVEL-- 217

  Fly   231 VSLPVSMQRAMAAEAEAARDARAKVIAAE---GEKKSATALKEASDVISASPSALQL 284
             ::...:|....:....:.|:..:.:|..   |...||     ...|.|..|..|::
Mouse   218 -AVEAVLQPPQDSLTVPSLDSTLQQLALHLLGGSMNSA-----VGHVPSPGPDTLEM 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 PHB 88..238 CDD:214581 54/149 (36%)
SPFH_like 107..314 CDD:302763 53/181 (29%)
Stoml1NP_081218.3 Tyrosine-type lysosomal sorting signal. /evidence=ECO:0000250|UniProtKB:Q9UBI4, ECO:0000255 6..10
PHB 77..217 CDD:214581 53/140 (38%)
SPFH_SLP-1 94..224 CDD:259814 45/133 (34%)
SCP2 305..396 CDD:280250
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062075at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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