DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mec2 and Stoml2

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001406011.1 Gene:Stoml2 / 66592 MGIID:1913842 Length:388 Species:Mus musculus


Alignment Length:299 Identity:81/299 - (27%)
Similarity:141/299 - (47%) Gaps:55/299 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 VAEYERAIIFRLGRLSGGARGPGMFFILPCIDEYRKV-DLRTVTFNVPQQEMLTKDSVTVTVDAV 155
            |.:.|..::.|:||.. ....||:..::|.:|..|.| .|:.:..|||:|..:|.|:||:.:|.|
Mouse    76 VPQQEAWVVERMGRFH-RILEPGLNVLIPVLDRIRYVQSLKEIVINVPEQSAVTLDNVTLQIDGV 139

  Fly   156 VYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGTRNLSELLTERETLAHNMQATLDEATEPWG 220
            :|.||.||..|...|||...:...||.||:|:.:|..:|.::..|||:|..|:...:::|.:.||
Mouse   140 LYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNANIVDAINQAADCWG 204

  Fly   221 VMVERVEIKDVSLPVSMQRAMAAEAEAARDARAKVIAAEGEKKSA-------------------- 265
            :...|.||||:.:|..::.:|..:.||.|..||.|:.:||.::||                    
Mouse   205 IRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKA 269

  Fly   266 ----TALKEASDVIS---ASPSALQL--------------------RYLQTLSSISAEKNSTIIF 303
                .|..|||.|::   |...|:::                    :|:...|.::.:.| |::.
Mouse   270 EQINQAAGEASAVLAKAKAKAEAIRILAGALTQHNGDAAASLTVAEQYVSAFSKLAKDSN-TVLL 333

  Fly   304 PLPMELLTPYLAKYAHLMG-----PPPELKQSPEKSDNI 337
            |.....:|..:|:...:.|     |.|..:.|.:...::
Mouse   334 PSNPSDVTSMVAQAMGVYGALTKAPVPGAQNSSQSRRDV 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 71/254 (28%)
Stoml2NP_001406011.1 HflC 76..335 CDD:440099 74/260 (28%)

Return to query results.
Submit another query.