DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and Stoml2

DIOPT Version :9

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_075720.1 Gene:Stoml2 / 66592 MGIID:1913842 Length:353 Species:Mus musculus


Alignment Length:299 Identity:81/299 - (27%)
Similarity:141/299 - (47%) Gaps:55/299 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 VAEYERAIIFRLGRLSGGARGPGMFFILPCIDEYRKV-DLRTVTFNVPQQEMLTKDSVTVTVDAV 155
            |.:.|..::.|:||.. ....||:..::|.:|..|.| .|:.:..|||:|..:|.|:||:.:|.|
Mouse    41 VPQQEAWVVERMGRFH-RILEPGLNVLIPVLDRIRYVQSLKEIVINVPEQSAVTLDNVTLQIDGV 104

  Fly   156 VYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGTRNLSELLTERETLAHNMQATLDEATEPWG 220
            :|.||.||..|...|||...:...||.||:|:.:|..:|.::..|||:|..|:...:::|.:.||
Mouse   105 LYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNANIVDAINQAADCWG 169

  Fly   221 VMVERVEIKDVSLPVSMQRAMAAEAEAARDARAKVIAAEGEKKSA-------------------- 265
            :...|.||||:.:|..::.:|..:.||.|..||.|:.:||.::||                    
Mouse   170 IRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKA 234

  Fly   266 ----TALKEASDVIS---ASPSALQL--------------------RYLQTLSSISAEKNSTIIF 303
                .|..|||.|::   |...|:::                    :|:...|.::.:.| |::.
Mouse   235 EQINQAAGEASAVLAKAKAKAEAIRILAGALTQHNGDAAASLTVAEQYVSAFSKLAKDSN-TVLL 298

  Fly   304 PLPMELLTPYLAKYAHLMG-----PPPELKQSPEKSDNI 337
            |.....:|..:|:...:.|     |.|..:.|.:...::
Mouse   299 PSNPSDVTSMVAQAMGVYGALTKAPVPGAQNSSQSRRDV 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 PHB 88..238 CDD:214581 52/146 (36%)
SPFH_like 107..314 CDD:302763 71/254 (28%)
Stoml2NP_075720.1 HflC 38..314 CDD:223407 77/274 (28%)
SPFH_paraslipin 74..184 CDD:259811 42/109 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 324..353 2/14 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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