DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and stoml3a

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001092220.1 Gene:stoml3a / 571219 ZFINID:ZDB-GENE-070620-18 Length:284 Species:Danio rerio


Alignment Length:271 Identity:163/271 - (60%)
Similarity:211/271 - (77%) Gaps:10/271 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 TSENEP---------KGCMEWVVTLFSVLIFIITSPIAIFICFKVVAEYERAIIFRLGR-LSGGA 110
            |..|.|         .||..|::.:.:::|.|...||.||:|.|:|.|||||:|||||| |....
Zfish    12 TVSNRPIIQDDKPPSMGCFGWLIIIIAIIITIGLLPITIFMCIKIVQEYERAVIFRLGRILDKKP 76

  Fly   111 RGPGMFFILPCIDEYRKVDLRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSM 175
            :|||:||:|||.|.:.||||||||||:|.||.||||||||.||.|||:|:.||:.:|..|.:.:.
Zfish    77 KGPGIFFVLPCTDSFMKVDLRTVTFNIPAQEFLTKDSVTVNVDGVVYFRVFDPICSVANVSNANQ 141

  Fly   176 STRLLAATTLRNIVGTRNLSELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRA 240
            :|:|||.|||||::||:||||||::||.::::||..|||||..||:.|||||||||.||:.:|||
Zfish   142 ATQLLAQTTLRNVLGTKNLSELLSDREGISNSMQIALDEATGVWGIKVERVEIKDVKLPIQLQRA 206

  Fly   241 MAAEAEAARDARAKVIAAEGEKKSATALKEASDVISASPSALQLRYLQTLSSISAEKNSTIIFPL 305
            |||||||:|:|||||||||||..::.||||||.||:.||||||||||||||:|:||:||||||||
Zfish   207 MAAEAEASREARAKVIAAEGEMNASRALKEASLVIAESPSALQLRYLQTLSTIAAERNSTIIFPL 271

  Fly   306 PMELLTPYLAK 316
            |::::..:.:|
Zfish   272 PIDIIHHFTSK 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 135/206 (66%)
stoml3aNP_001092220.1 SPFH_like 77..274 CDD:473137 135/196 (69%)

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