DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and stoml1

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001103502.1 Gene:stoml1 / 563294 ZFINID:ZDB-GENE-070209-241 Length:410 Species:Danio rerio


Alignment Length:229 Identity:79/229 - (34%)
Similarity:127/229 - (55%) Gaps:21/229 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GPASSTAYM-VNMGAAGMAPEPAL---RVP--GTTQQYRGF------KTSENE----PKGCMEW- 67
            |.:|...|. ::.|.:|....|.|   ..|  .:...:||.      |..:|:    .:|.:.| 
Zfish     5 GKSSGYEYQCLSQGESGYGETPGLFSSHSPFNNSHHDHRGHSFDYVPKVHQNDYTDKSQGLLSWL 69

  Fly    68 ---VVTLFSVLIFIITSPIAIFICFKVVAEYERAIIFRLGRLSGGARGPGMFFILPCIDEYRKVD 129
               :||....|...:|.||:.:...|||..|||.::|||||:. ..:|||:..|||.||::::||
Zfish    70 CNLIVTFLVFLFTFVTFPISGWFVLKVVPNYERVVVFRLGRIR-PPKGPGVVLILPFIDQWQRVD 133

  Fly   130 LRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGTRNL 194
            |||..||:|..::.||||..|:|.|.:.:||..|:.:|:.|:|.:.||||.|...:...:..::|
Zfish   134 LRTRAFNIPPCKVCTKDSGLVSVGADIQFRIWSPVMSVVAVQDLNSSTRLTAQNAMMTSLSKKSL 198

  Fly   195 SELLTERETLAHNMQATLDEATEPWGVMVERVEI 228
            .|:.|:|..|..::...::|.|:|||:.|:|||:
Zfish   199 REIQTDRLKLGEHLGMDMNEMTKPWGLEVDRVEL 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 48/122 (39%)
stoml1NP_001103502.1 SPFH_SLP-1 109..239 CDD:259814 50/125 (40%)
SCP2 301..405 CDD:460423
Blue background indicates that the domain is not in the aligned region.

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