DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and zgc:112408

DIOPT Version :9

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001017597.1 Gene:zgc:112408 / 550260 ZFINID:ZDB-GENE-050417-63 Length:291 Species:Danio rerio


Alignment Length:260 Identity:149/260 - (57%)
Similarity:216/260 - (83%) Gaps:2/260 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 NEPKGC--MEWVVTLFSVLIFIITSPIAIFICFKVVAEYERAIIFRLGRLSGGARGPGMFFILPC 121
            ::.|.|  ..:::|.||.|:...|.|::::.|.|||.|||||:|||||||.|||:|||:|:|:||
Zfish    32 DQSKSCGFCGYILTFFSCLLIFFTFPVSVWFCMKVVQEYERAVIFRLGRLLGGAKGPGLFWIIPC 96

  Fly   122 IDEYRKVDLRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLR 186
            :|.:||||||||:|::|.||:|||||||..|||||||||.:|..::.:||:.:.:|:::|.||||
Zfish    97 MDTFRKVDLRTVSFDIPAQEVLTKDSVTTMVDAVVYYRIFNPTVSITKVENANYATQMIAQTTLR 161

  Fly   187 NIVGTRNLSELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRAMAAEAEAARDA 251
            |::||::|:::|.:||.::..|:|.|..|::.||:.|||||:|||.||.::||||||||||:|||
Zfish   162 NMLGTKSLADILKDREEMSEQMEAVLYSASKNWGIKVERVELKDVKLPTTLQRAMAAEAEASRDA 226

  Fly   252 RAKVIAAEGEKKSATALKEASDVISASPSALQLRYLQTLSSISAEKNSTIIFPLPMELLTPYLAK 316
            ||||||||||.|::.|||||::|:|.||:||||||:|||:.|::|:|||||||:||:|::.::.:
Zfish   227 RAKVIAAEGEMKASRALKEAANVMSESPAALQLRYMQTLTEIASERNSTIIFPVPMDLMSGFMRR 291

  Fly   317  316
            Zfish   292  291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 PHB 88..238 CDD:214581 87/149 (58%)
SPFH_like 107..314 CDD:302763 125/206 (61%)
zgc:112408NP_001017597.1 HflC 44..290 CDD:223407 147/245 (60%)
SPFH_like 83..283 CDD:302763 123/199 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9274
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H121658
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54926
OrthoDB 1 1.010 - - D1062075at2759
OrthoFinder 1 1.000 - - FOG0000760
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100539
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.690

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