DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and stoml2

DIOPT Version :9

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001004808.1 Gene:stoml2 / 448051 XenbaseID:XB-GENE-1017042 Length:350 Species:Xenopus tropicalis


Alignment Length:346 Identity:90/346 - (26%)
Similarity:157/346 - (45%) Gaps:69/346 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 ALRVPGTTQQYRGFKTSENEPKGCMEWVVTLFSVLIFIITSPIAIFICFKVVAEYERAIIFRLGR 105
            :|.:.|:...|.  :|...|.:.|:...:.:.:|::|              |.:.|..:|.|:||
 Frog    10 SLLLRGSQVHYP--RTWNREAQRCLSSGLPMNTVVLF--------------VPQQEAWVIERMGR 58

  Fly   106 LSGGARGPGMFFILPCIDEYRKV-DLRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQ 169
            .. ....||:..::|.:|..|.| .|:.:..|||:|..::.|:||:.:|.|:|.||.||..|...
 Frog    59 FH-RILEPGLNVLIPILDRIRYVQSLKEIVINVPEQSAVSLDNVTLQIDGVLYLRIMDPYKASYG 122

  Fly   170 VEDYSMSTRLLAATTLRNIVGTRNLSELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLP 234
            |||...:...||.||:|:.:|...|.::..|||:|..|:...:::|::.||:...|.||||:.:|
 Frog   123 VEDPEYAVTQLAQTTMRSELGKLTLDKVFRERESLNANIVDAINQASDYWGIKCLRYEIKDIHVP 187

  Fly   235 VSMQRAMAAEAEAARDARAKVIAAEGEKKSATAL----KEASDVISASPSALQL----------- 284
            ..::.||..:.||.|..||.|:.:||.::||..:    |:|..:.|.:..|.|:           
 Frog   188 PKVKEAMQMQVEAERRKRAMVLESEGTRESAINVAEGQKQAQILASEAERAEQINKAAGEANAIL 252

  Fly   285 --------------------------------RYLQTLSSISAEKNSTIIFPLPMELLTPYLAKY 317
                                            :|:...|.::.|.| ||:.|.....::..:|:.
 Frog   253 AKAKARGDAIRMLAEALTQQNGNAAASLTVAEQYVLAFSKLAKESN-TILLPTNTGDISSMVAQA 316

  Fly   318 AHLMGPPPE---LKQSPEKSD 335
            ..:.|...:   .:.||..||
 Frog   317 MGIYGKMTQQQLAQSSPTLSD 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 PHB 88..238 CDD:214581 52/150 (35%)
SPFH_like 107..314 CDD:302763 70/254 (28%)
stoml2NP_001004808.1 HflC 45..318 CDD:223407 77/274 (28%)
SPFH_paraslipin 78..188 CDD:259811 41/109 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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