DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and stoml3

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_989344.1 Gene:stoml3 / 394970 XenbaseID:XB-GENE-1015871 Length:283 Species:Xenopus tropicalis


Alignment Length:255 Identity:149/255 - (58%)
Similarity:199/255 - (78%) Gaps:1/255 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GCMEWVVTLFSVLIFIITSPIAIFICFKVVAEYERAIIFRLGR-LSGGARGPGMFFILPCIDEYR 126
            |...|::.:.|..:..||.|::|:.|.|::.|||||::||||| :||.|:|||:.|:|||.|.:.
 Frog    28 GVCGWIILILSAFMAAITFPLSIWFCVKIIQEYERAVVFRLGRIISGKAKGPGVMFVLPCTDTFI 92

  Fly   127 KVDLRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGT 191
            |||||.::|.:|.||:|||||||.|||.||||.|...:.||..|.:..::|:.||.||||||:||
 Frog    93 KVDLRVISFAIPPQEILTKDSVTTTVDGVVYYNIQSAIKAVANVNNVHIATQQLAQTTLRNILGT 157

  Fly   192 RNLSELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRAMAAEAEAARDARAKVI 256
            :.|:.:|..||.:|||:|:.||.||..|||.|:|||::||.|||.|||||||||||||:|||||:
 Frog   158 QTLANILANREEIAHNIQSILDHATHKWGVKVDRVEMRDVRLPVQMQRAMAAEAEAAREARAKVV 222

  Fly   257 AAEGEKKSATALKEASDVISASPSALQLRYLQTLSSISAEKNSTIIFPLPMELLTPYLAK 316
            |||||..::.||||||.||:.||:||||||||||::|:||.||||:||||:||:..:|::
 Frog   223 AAEGEMNASRALKEASLVIAESPAALQLRYLQTLNTIAAENNSTIVFPLPIELMQGFLSR 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 129/206 (63%)
stoml3NP_989344.1 SPFH_like 73..274 CDD:473137 127/200 (64%)

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