DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and stoml2

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_957325.1 Gene:stoml2 / 394006 ZFINID:ZDB-GENE-040426-1139 Length:355 Species:Danio rerio


Alignment Length:313 Identity:87/313 - (27%)
Similarity:143/313 - (45%) Gaps:78/313 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PALRVPGTTQQYRGFKTSENEPKGCMEWVVTLFSVLIFIITSPIAIFICFKVVAEYERAIIFRLG 104
            |||.  ||..|.|              |..:|          |:...:.|  |.:.|..::.|:|
Zfish    22 PALW--GTRAQQR--------------WASSL----------PMNTVVLF--VPQQEAWVVERMG 58

  Fly   105 RLSGGARGPGMFFILPCIDEYRKV-DLRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVI 168
            |.. ....||:.|::|.:|..|.| .|:.:..:||:|..::.|:||:.:|.|:|.||.||..|..
Zfish    59 RFH-RILEPGLNFLIPILDRIRYVQSLKEIVIDVPEQSAVSLDNVTLQIDGVLYLRILDPFKASY 122

  Fly   169 QVEDYSMSTRLLAATTLRNIVGTRNLSELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSL 233
            .|||...:...||.||:|:.:|...|.::..|||:|..|:..::::|::.||:...|.||||:.:
Zfish   123 GVEDPEYAVTQLAQTTMRSELGKLTLDKVFRERESLNSNIVHSINQASDEWGIRCLRYEIKDIHV 187

  Fly   234 PVSMQRAMAAEAEAARDAR----------------------AKVIAAEGEKKSA--TALKEASDV 274
            |..::.:|..:.||.|..|                      |:::|:||||...  .|..||:.|
Zfish   188 PPRVKESMQMQVEAERRKRATVLESGGTRESAINVAEGRKQAQILASEGEKAEQINKAAGEANAV 252

  Fly   275 IS---ASPSALQL--------------------RYLQTLSSISAEKNSTIIFP 304
            ::   |...|::|                    :|:...|.::.|.| ||:.|
Zfish   253 LAKAEAKAKAIRLLSEALTQQNGNAAASLSVAEQYVSAFSKLAKESN-TILLP 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 71/246 (29%)
stoml2NP_957325.1 HflC 46..308 CDD:440099 76/261 (29%)

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