DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mec2 and phb2a

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_955975.1 Gene:phb2a / 324421 ZFINID:ZDB-GENE-030131-3141 Length:302 Species:Danio rerio


Alignment Length:238 Identity:58/238 - (24%)
Similarity:111/238 - (46%) Gaps:42/238 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 ERAIIF-RLGRLS-GGARGPGMFFILPCIDEYRKVDLRTVTFNVPQQEMLT--KDSVTVTVDAVV 156
            :||:|| |:|.:. ......|:.|.:|........|:|.....:   ..||  ||...|.:...|
Zfish    55 QRAVIFSRIGGMQMDTVLAEGLHFRMPWFQYPIIYDIRARPRKI---SSLTGSKDLQMVNIGLRV 116

  Fly   157 YYRISDPLYAVIQV------EDYSMSTRLLAA---TTLRNIVGTRNLSELLTERETLAHNMQATL 212
               :|.|:.:.:.:      :||  ..|:|.:   ..|:::|...|.|:|:|:|..::..::..|
Zfish   117 ---LSRPVASQLPIMYQQLGKDY--DERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRDL 176

  Fly   213 DEATEPWGVMVERVEIKDVSL-----------PVSMQRAMAAE---AEAARDARAKVIAAEGEKK 263
            .|..:.:.::::.|.|.::|.           .|:.|.|..|:   .:|.:|.|.|:|.||||.:
Zfish   177 IERAKDFNIILDDVAITELSFSKEYTAAVEAKQVAQQEAQRAQFFVEKAKQDQRQKIIQAEGEAE 241

  Fly   264 SATALKEASDVISASPSALQLRYLQTLSSI----SAEKNSTII 302
            :|..|.:|   ::.:|..|:||.::...:|    :|.:|...:
Zfish   242 AAKMLGQA---VTKNPGYLKLRRIRAAQNIAKTVAASQNKVYL 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 52/226 (23%)
phb2aNP_955975.1 SPFH_prohibitin 49..243 CDD:259799 48/195 (25%)

Return to query results.
Submit another query.