DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mec2 and phb

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_958454.1 Gene:phb / 321346 ZFINID:ZDB-GENE-030131-6577 Length:271 Species:Danio rerio


Alignment Length:233 Identity:62/233 - (26%)
Similarity:109/233 - (46%) Gaps:34/233 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 RAIIF-RLGRLSGGARGPGMFFILPCIDEYRKVDLRTVTFNVPQQEMLT--KDSVTVTVDAVVYY 158
            ||:|| |...:.....|.|..|::|.:.:....|.|:...|||   ::|  ||...|.:...:.:
Zfish    34 RAVIFDRFRGVQDVVVGEGTHFLIPWVQKPIIFDCRSRPRNVP---VITGSKDLQNVNITLRILF 95

  Fly   159 R-ISDPLYAVIQV--EDYSMSTRLLAATT---LRNIVGTRNLSELLTERETLAHNMQATLDEATE 217
            | ::..|..:...  |||  ..|:|.:.|   |:::|...:..||:|:||.::..:...|.|...
Zfish    96 RPVAGQLPRIFTSIGEDY--DERVLPSITTEVLKSVVARFDAGELITQRELVSRQVSEDLTERAS 158

  Fly   218 PWGVMVERVEI------KDVSLPVSMQRAMAAEAEAAR--------DARAKVIAAEGEKKSATAL 268
            .:|::::.|.:      |:.:..|.|::....|||.||        ..:|.:|:|||:  |..||
Zfish   159 TFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFVVEKAEQQKQAAIISAEGD--SQAAL 221

  Fly   269 KEASDVISASPSALQLRYLQTLSSI----SAEKNSTII 302
            ..|:.:..|....::||.|:....|    |..:|.|.:
Zfish   222 LIANSLAEAGDGLVELRKLEAAEDIAFQLSRARNVTYL 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 57/222 (26%)
phbNP_958454.1 SPFH_prohibitin 26..220 CDD:259799 51/192 (27%)

Return to query results.
Submit another query.