DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and Stoml1

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001292167.1 Gene:Stoml1 / 300748 RGDID:1559463 Length:398 Species:Rattus norvegicus


Alignment Length:193 Identity:65/193 - (33%)
Similarity:109/193 - (56%) Gaps:8/193 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 MAPEPALRVPGTTQQYRGFKTSENEPKGCMEWVVTLFSVLIFIITSPIAIFICFKVVAEYERAII 100
            ::|||....||.       ...|:.|......:::....|:.::|.||:.:...|:|..|||.|:
  Rat    33 LSPEPGGVGPGA-------DAPESWPSCLCHGLISFLGFLLLLLTFPISGWFALKIVPTYERMIV 90

  Fly   101 FRLGRLSGGARGPGMFFILPCIDEYRKVDLRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLY 165
            |||||:. ..:||||..:||.||.:::|||||..||||..::.:||...::|.|.|.:||.||:.
  Rat    91 FRLGRIR-NPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVL 154

  Fly   166 AVIQVEDYSMSTRLLAATTLRNIVGTRNLSELLTERETLAHNMQATLDEATEPWGVMVERVEI 228
            :|:.|:|.:.:||:.|...:...:..|.|.|:..|:..:...:...:::.|..||:.|:|||:
  Rat   155 SVMAVKDLNAATRMTAHNAMTKALLRRPLQEIQMEKLKIGDQLLLEINDVTRAWGLEVDRVEL 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 43/122 (35%)
Stoml1NP_001292167.1 SPFH_SLP-1 94..224 CDD:259814 45/125 (36%)
SCP2 311..395 CDD:460423
Blue background indicates that the domain is not in the aligned region.

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