DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and Stoml2

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001026816.1 Gene:Stoml2 / 298203 RGDID:1308285 Length:353 Species:Rattus norvegicus


Alignment Length:294 Identity:82/294 - (27%)
Similarity:139/294 - (47%) Gaps:55/294 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 VAEYERAIIFRLGRLSGGARGPGMFFILPCIDEYRKV-DLRTVTFNVPQQEMLTKDSVTVTVDAV 155
            |.:.|..::.|:||.. ....||:..::|.:|..|.| .|:.:..|||:|..:|.|:||:.:|.|
  Rat    41 VPQQEAWVVERMGRFH-RILEPGLNVLIPVLDRIRYVQSLKEIVINVPEQSAVTLDNVTLQIDGV 104

  Fly   156 VYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGTRNLSELLTERETLAHNMQATLDEATEPWG 220
            :|.||.||..|...|||...:...||.||:|:.:|..:|.::..|||:|..|:...:::|.:.||
  Rat   105 LYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNANIVDAINQAADCWG 169

  Fly   221 VMVERVEIKDVSLPVSMQRAMAAEAEAARDARAKVIAAEGEKKSA-------------------- 265
            :...|.||||:.:|..::.:|..:.||.|..||.|:.:||.::||                    
  Rat   170 IRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKA 234

  Fly   266 ----TALKEASDVIS---ASPSALQL--------------------RYLQTLSSISAEKNSTIIF 303
                .|..|||.|::   |...|:::                    :|:...|.::.:.| |::.
  Rat   235 EQINQAAGEASAVLAKAKAKAEAIRILAGALTQHNGDAAASLTVAEQYVSAFSKLAKDSN-TVLL 298

  Fly   304 PLPMELLTPYLAKYAHLMG-----PPPELKQSPE 332
            |.....:|..:|:...:.|     |.|..:.|.|
  Rat   299 PSNPSDVTSMVAQAMGVYGALTKAPVPGAQNSSE 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 71/254 (28%)
Stoml2NP_001026816.1 HflC 41..300 CDD:440099 74/260 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 324..353 3/9 (33%)

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