DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and Stoml3

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_694796.1 Gene:Stoml3 / 229277 MGIID:2388072 Length:287 Species:Mus musculus


Alignment Length:249 Identity:143/249 - (57%)
Similarity:193/249 - (77%) Gaps:1/249 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GCMEWVVTLFSVLIFIITSPIAIFICFKVVAEYERAIIFRLGRLSGG-ARGPGMFFILPCIDEYR 126
            |...|::...|.|:.::|.||::::|.|::.|||||::|||||:... |:|||:..:|||||.:.
Mouse    21 GVCGWILFFLSFLLMLVTFPISVWMCLKIIKEYERAVVFRLGRIQADKAKGPGLILVLPCIDVFV 85

  Fly   127 KVDLRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGT 191
            ||||||||.|:|.||:||:||||..||.||||||...:.||..|.|...:|.|||.|||||::||
Mouse    86 KVDLRTVTCNIPPQEILTRDSVTTQVDGVVYYRIYSAVSAVANVNDVHQATFLLAQTTLRNVLGT 150

  Fly   192 RNLSELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRAMAAEAEAARDARAKVI 256
            :.||::|:.||.:||::|..||:|||.||:.|.|||||||.:||.:||:|||||||.|:|||||:
Mouse   151 QTLSQILSGREEIAHSIQTLLDDATELWGIRVARVEIKDVRIPVQLQRSMAAEAEATREARAKVL 215

  Fly   257 AAEGEKKSATALKEASDVISASPSALQLRYLQTLSSISAEKNSTIIFPLPMELL 310
            |||||..::.:||.||.|::.||.||||||||||::::.||||||:|||||.:|
Mouse   216 AAEGEMNASKSLKSASMVLAESPVALQLRYLQTLTTVATEKNSTIVFPLPMNIL 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 124/205 (60%)
Stoml3NP_694796.1 SPFH_like 69..267 CDD:473137 122/197 (62%)

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