DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and sto-1

DIOPT Version :9

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_509281.1 Gene:sto-1 / 181017 WormBaseID:WBGene00006063 Length:330 Species:Caenorhabditis elegans


Alignment Length:288 Identity:147/288 - (51%)
Similarity:208/288 - (72%) Gaps:6/288 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SSTAYMVNMGAAGMAPEPALRVPGTTQQYRGFKTSENEPKGCMEWVVTLFSVLIFIITSPIAIFI 87
            |.|..|..|.      :|:.:......:.:....:.:...||.|......|.::..:|.|:::|:
 Worm     4 SETVEMQEMA------QPSGQQRDVEARVQSAPANHSHDAGCTEMFCIAMSYVLIFLTFPVSVFM 62

  Fly    88 CFKVVAEYERAIIFRLGRLSGGARGPGMFFILPCIDEYRKVDLRTVTFNVPQQEMLTKDSVTVTV 152
            |.|:|.||:||::||||||....:|||:|||:||||.:..:|||..::|||.||:|::|||||:|
 Worm    63 CIKIVQEYQRAVVFRLGRLVPDVKGPGIFFIIPCIDTFLNIDLRVASYNVPSQEILSRDSVTVSV 127

  Fly   153 DAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGTRNLSELLTERETLAHNMQATLDEATE 217
            |||||:::.||:.:|:.|.:.:.||:|||.||||.|:||..|||:|::||.::.:|:.:||||||
 Worm   128 DAVVYFKVFDPITSVVGVGNATDSTKLLAQTTLRTILGTHTLSEILSDREKISADMKISLDEATE 192

  Fly   218 PWGVMVERVEIKDVSLPVSMQRAMAAEAEAARDARAKVIAAEGEKKSATALKEASDVISASPSAL 282
            |||:.|||||::||.||..|||||||||||.|||.||:||||||.:::.||.||:.:||.|..|:
 Worm   193 PWGIKVERVELRDVRLPSQMQRAMAAEAEATRDAGAKIIAAEGELRASAALAEAATIISKSEGAM 257

  Fly   283 QLRYLQTLSSISAEKNSTIIFPLPMELL 310
            |||||.||::||:||.||||||.|||:|
 Worm   258 QLRYLHTLNAISSEKTSTIIFPFPMEIL 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 PHB 88..238 CDD:214581 84/149 (56%)
SPFH_like 107..314 CDD:302763 122/204 (60%)
sto-1NP_509281.1 PHB 62..220 CDD:214581 91/157 (58%)
SPFH_like 86..283 CDD:302763 119/196 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167807
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54926
OrthoDB 1 1.010 - - D1062075at2759
OrthoFinder 1 1.000 - - FOG0000760
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100539
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.760

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