DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and mec-2

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001368712.1 Gene:mec-2 / 180826 WormBaseID:WBGene00003166 Length:1239 Species:Caenorhabditis elegans


Alignment Length:284 Identity:179/284 - (63%)
Similarity:224/284 - (78%) Gaps:4/284 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GCMEWVVTLFSVLIFIITSPIAIFICFKVVAEYERAIIFRLGRL-SGGARGPGMFFILPCIDEYR 126
            |...|::|:.|.|:...|.||:..:|.|||.|||||:||||||| .|||:|||:|||:||||.||
 Worm   115 GVCGWILTILSYLLIFFTLPISACMCIKVVQEYERAVIFRLGRLMPGGAKGPGIFFIVPCIDTYR 179

  Fly   127 KVDLRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGT 191
            |||||.::|.||.||:|:||||||.||||||:|||:...:|..|||.:.||:|||.||||||:||
 Worm   180 KVDLRVLSFEVPPQEILSKDSVTVAVDAVVYFRISNATISVTNVEDAARSTKLLAQTTLRNILGT 244

  Fly   192 RNLSELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRAMAAEAEAARDARAKVI 256
            :.|:|:|::||.::|.||.|||||||||||.|||||:|||.|||.:||||||||||||:||||||
 Worm   245 KTLAEMLSDREAISHQMQTTLDEATEPWGVKVERVEVKDVRLPVQLQRAMAAEAEAAREARAKVI 309

  Fly   257 AAEGEKKSATALKEASDVISASPSALQLRYLQTLSSISAEKNSTIIFPLPMELLTPYLAKYAHLM 321
            .||||:|::.|||||::||:.|||||||||||||:|||||||||||||.|::||:.:|.:....:
 Worm   310 VAEGEQKASRALKEAAEVIAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLSAFLQRTPPKV 374

  Fly   322 GPPPELKQSPEKSDNIVLDALDAW 345
            ..||.|   |:|..:..|.....|
 Worm   375 EEPPSL---PKKIRSCCLYKYPDW 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 147/206 (71%)
mec-2NP_001368712.1 SPFH_stomatin 160..361 CDD:259801 145/200 (73%)
PTZ00121 <571..>913 CDD:173412
Blue background indicates that the domain is not in the aligned region.

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