DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and sto-2

DIOPT Version :9

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001257021.1 Gene:sto-2 / 180802 WormBaseID:WBGene00006064 Length:375 Species:Caenorhabditis elegans


Alignment Length:367 Identity:191/367 - (52%)
Similarity:245/367 - (66%) Gaps:58/367 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EPHQD--SPVYANYEDMRNSG--PASST----AYMVNMGAAGMA------------PEPALRVPG 46
            :|.::  ||...|..:..|||  .||||    :..::.|.:|.:            .|..:::|.
 Worm     4 QPSEESASPAPVNPGNSGNSGNRRASSTRISFSDQLDGGDSGDSSSNESERLMESDDEGNIQIPV 68

  Fly    47 TTQQYRG------------FKTSENE--------------PK-----------GCMEWVVTLFSV 74
            .|.|.||            |...|.|              ||           |...|.:...|.
 Worm    69 PTGQPRGRMGRRFTLNPLIFAKEEREARRQSLAQLKLSYYPKHMNPEHYDTGLGFCGWFLMGLSW 133

  Fly    75 LIFIITSPIAIFICFKVVAEYERAIIFRLGRL-SGGARGPGMFFILPCIDEYRKVDLRTVTFNVP 138
            ::.|.|.|::|:.|.|||.|||||:||||||| .|||:|||:||:||||:.|.|||||||:|:||
 Worm   134 IMVISTFPVSIYFCMKVVQEYERAVIFRLGRLIGGGAKGPGIFFVLPCIESYTKVDLRTVSFSVP 198

  Fly   139 QQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGTRNLSELLTERET 203
            .||:|||||||.:||||:|||||:...:|..||:...||||||.|||||::|||:|||:|::|||
 Worm   199 PQEILTKDSVTTSVDAVIYYRISNATVSVANVENAHHSTRLLAQTTLRNMLGTRSLSEILSDRET 263

  Fly   204 LAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRAMAAEAEAARDARAKVIAAEGEKKSATAL 268
            ||.:||..||||||.||:.|||||||||.||:.:||||||||||.|:|||||||||||:|::.||
 Worm   264 LAASMQTILDEATESWGIKVERVEIKDVRLPIQLQRAMAAEAEATREARAKVIAAEGEQKASRAL 328

  Fly   269 KEASDVISASPSALQLRYLQTLSSISAEKNSTIIFPLPMELL 310
            ::|:.||:.||:||||||||||:|::|||||||||||||||:
 Worm   329 RDAASVIAQSPAALQLRYLQTLNSVAAEKNSTIIFPLPMELV 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 PHB 88..238 CDD:214581 104/150 (69%)
SPFH_like 107..314 CDD:302763 144/204 (71%)
sto-2NP_001257021.1 PHB 146..298 CDD:214581 104/151 (69%)
SPFH_like 168..368 CDD:302763 141/199 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54926
OrthoDB 1 1.010 - - D1062075at2759
OrthoFinder 1 1.000 - - FOG0000760
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100539
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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