DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and phb-2

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_495250.2 Gene:phb-2 / 174034 WormBaseID:WBGene00004015 Length:294 Species:Caenorhabditis elegans


Alignment Length:252 Identity:63/252 - (25%)
Similarity:114/252 - (45%) Gaps:31/252 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 FKVVAEYERAIIF-RLGRLSGGARGPGMFFILPCIDEYRKVDLRTVTFNVPQQEMLTKDSVTVTV 152
            |.|.|.: |||:| |:|.||......|:.|.:|........|:|... |..:....:||...|.:
 Worm    41 FTVEAGH-RAIMFNRIGGLSTDLYKEGLHFRIPWFQYPIIYDIRARP-NQIRSPTGSKDLQMVNI 103

  Fly   153 DAVVYYRIS-DPLYAVIQVEDYSMSTRLLAA---TTLRNIVGTRNLSELLTERETLAHNMQATLD 213
            ...|..|.: :.|..:.:....:...|:|.:   ..|:.:|...|.|:|:|:|:.::..::.||.
 Worm   104 GLRVLSRPNPEHLVHIYRTLGQNWEERVLPSICNEVLKGVVAKFNASQLITQRQQVSMLVRKTLI 168

  Fly   214 EATEPWGVMVERVEIKDVSLPVSMQRAMAAEAEAARDA--------------RAKVIAAEGEKKS 264
            |....:.::::.|.:.:::.......|:.|:..||::|              :.|::.||||.:|
 Worm   169 ERALDFNIILDDVSLTELAFSPQYSAAVEAKQVAAQEAQRATFYVERAKQQKQEKIVQAEGEAES 233

  Fly   265 ATALKEASDVISASPSALQLRYL---QTLSSISAEKNSTIIFPLPMELL----TPYL 314
            |..|.||   :...|..|:||.:   |.::.|.:|..:....|....:|    |.||
 Worm   234 AKLLGEA---MKNDPGFLKLRKIRAAQKIARIVSESGNKTYLPTGGLMLNIADTDYL 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 51/231 (22%)
phb-2NP_495250.2 SPFH_prohibitin 40..234 CDD:259799 46/194 (24%)
PRK11029 <205..287 CDD:182913 21/84 (25%)

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