DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and Nphs2

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_570841.3 Gene:Nphs2 / 170672 RGDID:620461 Length:383 Species:Rattus norvegicus


Alignment Length:347 Identity:130/347 - (37%)
Similarity:203/347 - (58%) Gaps:27/347 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EPHQ-DSPVYANYEDMRNSGPASSTAYMVNMGAAGMAPEPALRVPGTTQQYRGFKTSENEPKGCM 65
            |.|: .:....|.:::|:.|...:....:   .....||..::..|.               |..
  Rat    55 EEHRAPAATVVNVDEVRSPGEEGTEVVAL---LESERPEEGIKPSGL---------------GAC 101

  Fly    66 EWVVTLFSVLIFIITSPIAIFICFKVVAEYERAIIFRLGR-LSGGARGPGMFFILPCIDEYRKVD 129
            ||::.|.|::..|:|.|.:|:.|.|||.||||.||||||. |.|.|:|||:||.|||:|.|.|||
  Rat   102 EWLLVLSSLIFIIVTFPFSIWFCIKVVQEYERVIIFRLGHLLPGRAKGPGLFFFLPCLDTYHKVD 166

  Fly   130 LRTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGTRNL 194
            ||..|..:|..|::|||...:.:|||.|||:.:....:..:...|.:.:.|..||::.::..|:|
  Rat   167 LRLQTLEIPFHEVVTKDMFIMEIDAVCYYRMENASLLLSSLAHVSKAIQFLVQTTMKRLLAHRSL 231

  Fly   195 SELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRAMAAEAEAARDARAKVIAAE 259
            :|:|.||:::|.:::..||..|..||:.|||.|||||.||..:|.::|.||||.|.|:.:|||||
  Rat   232 TEILLERKSIAQDVKVALDSVTCVWGIKVERTEIKDVRLPAGLQHSLAVEAEAQRQAKVRVIAAE 296

  Fly   260 GEKKSATALKEASDVISASPSALQLRYLQTLSSISAEKNSTIIFPLPMELLTPYLAKYAHLMG-- 322
            |||.::.:|:.|::::|.:|:|:|||||.||.|:|.:|.||::.|||.::|....:......|  
  Rat   297 GEKAASESLRMAAEILSGTPAAVQLRYLHTLQSLSTDKPSTVVLPLPFDMLNLLSSPSNRAQGSI 361

  Fly   323 -----PPPELKQSPEKSDNIVL 339
                 |.|....:|::.|:.:|
  Rat   362 NYPSSPKPVEPLNPKRKDSPML 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 92/206 (45%)
Nphs2NP_570841.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..73 4/17 (24%)
SPFH_podocin 122..344 CDD:259809 105/221 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..383 5/27 (19%)

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