DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and stom

DIOPT Version :9

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_004916682.2 Gene:stom / 100379777 XenbaseID:XB-GENE-995463 Length:303 Species:Xenopus tropicalis


Alignment Length:310 Identity:171/310 - (55%)
Similarity:231/310 - (74%) Gaps:16/310 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MRNSGPASSTAYMVNMGAAGMAPEPA--------LRVPGTTQQYRGFKTSENEPKGCMEWVVTLF 72
            |...|.::|.      ||.|:..:|:        |:.....|:.|..:.|:. ..||..|.:.:.
 Frog     1 MNRVGDSNSA------GAQGLLVDPSDRDMADTELKSRRANQEDRNIEESDG-GLGCCGWFLVIL 58

  Fly    73 SVLIFIITSPIAIFICFKVVAEYERAIIFRLGR-LSGGARGPGMFFILPCIDEYRKVDLRTVTFN 136
            |....::|.||::::|.|:|.|||||||||||| |.|||:|||:||:|||.|.:..||:||::|:
 Frog    59 SFFFTLLTFPISVWMCIKIVKEYERAIIFRLGRILRGGAKGPGLFFVLPCTDSFINVDMRTISFD 123

  Fly   137 VPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGTRNLSELLTER 201
            :|.||:||||||||:||.|||||:::...||..:.:...:|||||.|||||::||:|||::|::|
 Frog   124 IPPQEILTKDSVTVSVDGVVYYRVNNATLAVANITNADSATRLLAQTTLRNVLGTKNLSQILSDR 188

  Fly   202 ETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRAMAAEAEAARDARAKVIAAEGEKKSAT 266
            |.:|||||:|||.||:.||:.|||||||||.|||.:||||||||||||:|||||||||||..::.
 Frog   189 EEIAHNMQSTLDVATDDWGIKVERVEIKDVKLPVQLQRAMAAEAEAAREARAKVIAAEGEMNASR 253

  Fly   267 ALKEASDVISASPSALQLRYLQTLSSISAEKNSTIIFPLPMELLTPYLAK 316
            ||||||.|||.||:||||||||||::|::||||||:||||::||..::.|
 Frog   254 ALKEASIVISESPAALQLRYLQTLTTIASEKNSTIVFPLPLDLLKGFMQK 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 PHB 88..238 CDD:214581 95/150 (63%)
SPFH_like 107..314 CDD:302763 136/206 (66%)
stomXP_004916682.2 SPFH_stomatin 94..295 CDD:259801 134/200 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9176
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54926
OrthoDB 1 1.010 - - D1062075at2759
OrthoFinder 1 1.000 - - FOG0000760
OrthoInspector 1 1.000 - - mtm9367
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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