DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP18B and AT3G11490

DIOPT Version :10

Sequence 1:NP_573352.2 Gene:RhoGAP18B / 32898 FlyBaseID:FBgn0261461 Length:1317 Species:Drosophila melanogaster
Sequence 2:NP_187756.1 Gene:AT3G11490 / 820322 AraportID:AT3G11490 Length:435 Species:Arabidopsis thaliana


Alignment Length:412 Identity:84/412 - (20%)
Similarity:147/412 - (35%) Gaps:110/412 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   925 LATSNTTSLAPRSDDSGCSCEA--EDSYNHQHNPTPAIPKPLKEEWERAVLAAGAVAGKRGVAPR 987
            |.:|.:......|..|..||..  :.|....|:|.....:..:||.|                 .
plant     5 LKSSQSCHFPSPSSSSSTSCGGGNDGSNRDPHSPFNISRREEEEEEE-----------------E 52

  Fly   988 TGRKLRVRSNARLLLTDSVLAWRETLQDVNCCEDEEDMI-----VPVTDILRAQQIQEDNEVQQT 1047
            ...|.|.|......|...|.|.|.::  :..|..|||:.     || ||:.....:..|.     
plant    53 RSEKERERFELSSALEILVSAIRRSV--IGGCVGEEDLCSMEIGVP-TDVRHVAHVTFDR----- 109

  Fly  1048 QQSTILQRYKSVSIGNLLDLPGEDDKKSIKNRMRMKFAVNSNVFRINRSPKSEKKSRSRRGQVNS 1112
                         ....|.||.|.:.:.    .|...:.::.||.:  |.:|.:.|...||.:  
plant   110 -------------FHGFLGLPVEFEPEV----PRRAPSASATVFGV--STESMQLSYDTRGNI-- 153

  Fly  1113 LYLDEQKYPLFAAPLSALELNMTDHPNVPRFVVDVCAYIEQPECIEQDGLYRASGNKVLVDELRK 1177
                                       ||..::.:.:::.....:..:|::|.:|.....:.:|:
plant   154 ---------------------------VPTILLMMQSHLYSRGGLRVEGIFRINGENGQEEYIRE 191

  Fly  1178 KLTHVYDPRWLKTDDIHTLTSLHKQFFRELTSPLITQEAYERLGRSLNDDAAIERMSLAFDDMPE 1242
            :|.....|   ...|:|.|.||.|.:||||.|.::...:.|::..|.::|..:|.:.|    :|.
plant   192 ELNKGIIP---DNIDVHCLASLIKAWFRELPSGVLDSLSPEQVMESESEDECVELVRL----LPS 249

  Fly  1243 PNRSTLRFLIRHLTRVAAASASNRMPSTNLAIVWGP----------CLLSANQIQLDIGRMNMLA 1297
            ...|.|.:.|..:..|......|:|.:.|:|:|:.|          .|:.|.|:      ||.|.
plant   250 TEASLLDWAINLMADVVEMEQLNKMNARNIAMVFAPNMTQMLDPLTALMYAVQV------MNFLK 308

  Fly  1298 KVLI-------ENYDRIFHPDN 1312
            .:::       |:.|::....|
plant   309 TLIVKTLKDRKESRDKLVPASN 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP18BNP_573352.2 RhoGAP 1141..1285 CDD:459875 36/153 (24%)
AT3G11490NP_187756.1 CRIB 91..131 CDD:238077 10/62 (16%)
RhoGAP 154..313 CDD:214618 41/171 (24%)

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