DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP18B and chn2

DIOPT Version :10

Sequence 1:NP_573352.2 Gene:RhoGAP18B / 32898 FlyBaseID:FBgn0261461 Length:1317 Species:Drosophila melanogaster
Sequence 2:XP_073781591.1 Gene:chn2 / 570999 ZFINID:ZDB-GENE-091020-5 Length:472 Species:Danio rerio


Alignment Length:203 Identity:57/203 - (28%)
Similarity:97/203 - (47%) Gaps:24/203 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  1122 LFAAPLSALELNMTDHPNVPR-FVVDVCAYIEQPECIEQDGLYRASGNKVLVDELRKKLTHVYDP 1185
            :|:..|:.|   :..| |.|| .|:|:|....:...::.:||||.||....::::|..    :|.
Zfish   278 VFSCDLTTL---VKAH-NTPRPMVLDMCIREIEHRGLKSEGLYRVSGFTEHIEDVRLS----FDR 334

  Fly  1186 RWLKTD-------DIHTLTSLHKQFFRELTSPLITQEAYERL---GRSLNDDAAIERMSLAFDDM 1240
            ...|.|       ||:.:....|.:.|:|..|:||.:.|.|.   .:..:.|:.:|.:......:
Zfish   335 DGEKADISANIYPDINIIAGALKLYLRDLPIPVITYDVYSRFIQAAKITDPDSRLEAVHDGLLQL 399

  Fly  1241 PEPNRSTLRFLIRHLTRVAAASASNRMPSTNLAIVWGPCLLSANQIQL-----DIGRMNMLAKVL 1300
            |..:..|||:|:.||.||......|.|.|.||.||:||.|:....:..     |:....::.::|
Zfish   400 PPAHYETLRYLMTHLKRVTMYEKDNYMNSENLGIVFGPTLMRPPDLNTLTTLNDMRYQKLIVQLL 464

  Fly  1301 IENYDRIF 1308
            ||:.|.:|
Zfish   465 IEHEDILF 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP18BNP_573352.2 RhoGAP 1141..1285 CDD:459875 46/154 (30%)
chn2XP_073781591.1 None

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