DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP18B and arhgap29a

DIOPT Version :10

Sequence 1:NP_573352.2 Gene:RhoGAP18B / 32898 FlyBaseID:FBgn0261461 Length:1317 Species:Drosophila melanogaster
Sequence 2:XP_693227.4 Gene:arhgap29a / 564805 ZFINID:ZDB-GENE-030131-9510 Length:1344 Species:Danio rerio


Alignment Length:774 Identity:137/774 - (17%)
Similarity:252/774 - (32%) Gaps:260/774 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   628 VNEQQQQQQQQPITQNCVIKVRRPAPKVPVRNPNTSLSNPRQIEEEQTKPNGGKKDNLRGNSFAA 692
            |.||.|::|::....:..::..|............:.|:..::||||....|||:...|      
Zfish   344 VKEQWQREQKKMHEADSALRKARLLQAQRQEEYEKARSSTSRVEEEQISGAGGKQLEKR------ 402

  Fly   693 ENSSPEEQEEESIYQPIWQFKTIEPVDQEIIEALPVEGEDEEDEDEED---DDVDDEEEDLGDYD 754
                 .:.|||::.:.                        ||.:|...   .||..:..||.   
Zfish   403 -----RKLEEEALLKA------------------------EEAQDHYKLCVTDVGVKRVDLA--- 435

  Fly   755 ESLPSDADPDVMALQAAAVFAAGVRHKLSTSTLTKRSKMMMPTPLPSPTASMDHGAWETDMEFMY 819
                                      |..:..||:..:::....|.....:::   |       :
Zfish   436 --------------------------KTKSEILTQIRELVFQCDLTLKAVTVN---W-------F 464

  Fly   820 SRESKEEADETLSLGSTVTNSTATLGSISSTGSSVTGQPKDTPKDLPADQQPSVVVHPILRNICI 884
            ..:..:.|...::..|...||     .:...|...|    :..|.||:|:               
Zfish   465 QMQQAQVASLPINFQSLCENS-----KLYEPGLCYT----EFVKSLPSDR--------------- 505

  Fly   885 FYSQKDPKKYSAIFYDYHLSLVHQRFMTRIRRPAPPPPAQLATSNTTSLAPRSDDSGCSCEAEDS 949
              |:.:.       :.:.:|..|.   |.::|.....||        :|...|..||....|::.
Zfish   506 --SRVES-------FSFDISSTHN---TGLKRAVNSTPA--------ALVHLSQVSGDFLSADEV 550

  Fly   950 YNHQHNPTPAIPKPLKEEWERAVLAAGAVAGKRGVAPRTGRKLRVRSNARLLLTDSVLAWRETLQ 1014
            .:|....|..:|                  ..|..:....:.||::...|:        ||.:.|
Zfish   551 ESHVQARTAKMP------------------DGRSHSTTDVQALRIQGPFRV--------WRTSSQ 589

  Fly  1015 DVNCCEDEEDM------------------------IVPVTDILRAQQIQEDNEVQQTQQSTILQR 1055
            ....|.|.|..                        ..|.|..:.:....::.|......:.:   
Zfish   590 GGGMCSDSESAGGSSESRSMDSPTASPGDFKRRLPRTPSTGTMSSADDLDEREPPSPSDNGL--- 651

  Fly  1056 YKSVSIGNLLDLPGEDDKKSIKNRMRMKFAVNSNVFRINRSPKSEKKSRS--------------- 1105
              |..:......||     ..:| .:|..|..::..|..|:|...::..|               
Zfish   652 --SEMVTEAASSPG-----PFRN-TQMSKAAQTHKLRKLRAPSKCRECDSLVVFHGAECEECSLA 708

  Fly  1106 -RRGQVNSLYLD------EQKYPLFAAPLSALELNMTDHPNVPRFVVDVCAYIEQPECIEQDGLY 1163
             .:..:.:|.:.      :.|..|||...:....|..|  .:| |::..|....:...:...|:|
Zfish   709 CHKKCLETLAIQCGHKKLQGKLHLFAIDFAQAAKNSPD--GIP-FIIKKCTSEIENRALNIKGIY 770

  Fly  1164 RASGNKVLVDELRKKLTHVYDPRWLKTDDI--HTLTSLHKQFFRELTSPLITQEAYERLGRSLND 1226
            |.:|.|..|::|.:...:..|  .::..|:  |.::::.|.:.|:|..|||       |.|..||
Zfish   771 RVNGAKSRVEKLCQAFENGKD--LVELSDLYPHDISNVLKLYLRQLPEPLI-------LFRYYND 826

  Fly  1227 --DAAIERMSLAFDD--------------------------------MPEPNRSTLRFLIRHLTR 1257
              ..|.|..|:..|:                                :|..:..||:|||:||.|
Zfish   827 FIGLAKESQSIIVDEVEASRGCPTSDTPQISVELNRVLFKIKDLLRQLPPAHYKTLQFLIQHLHR 891

  Fly  1258 VAAASASNRMPSTNLAIVWGPCLLSANQIQLDIGRMN--------MLAKVLIENYDRIF 1308
            |:..:..|:|.|:||.|::||.|:...|...::...:        ::.::||.:|:.||
Zfish   892 VSERADENKMTSSNLGIIFGPTLIKPRQADAEVSLSSLVDYPYQALIVELLIRHYEMIF 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP18BNP_573352.2 RhoGAP 1141..1285 CDD:459875 46/179 (26%)
arhgap29aXP_693227.4 BAR 230..484 CDD:472257 32/213 (15%)
C1_GMIP-like 675..725 CDD:410366 5/49 (10%)
RhoGAP 733..945 CDD:470621 53/223 (24%)

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