Sequence 1: | NP_573352.2 | Gene: | RhoGAP18B / 32898 | FlyBaseID: | FBgn0261461 | Length: | 1317 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021335715.1 | Gene: | arhgap12b / 393848 | ZFINID: | ZDB-GENE-040426-1727 | Length: | 882 | Species: | Danio rerio |
Alignment Length: | 929 | Identity: | 188/929 - (20%) |
---|---|---|---|
Similarity: | 323/929 - (34%) | Gaps: | 309/929 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 564 ALMAAPKPNGEAERPSTNSNNNTINCSSNNNNDN------------------------------- 597
Fly 598 --ISNNNNNHHTVDNESGINNNKNNDGNANCNVNEQQQQQQQQPITQNCVIKVRRPAPKVPVRNP 660
Fly 661 NTSLSNPRQIEEEQTKPNGGKKDNLRGNSFAAENSSPEEQE-------------EESIYQPIWQF 712
Fly 713 K----TIEPVDQEIIEALPVEGEDEEDED---------------------EEDDDVD-DEEEDLG 751
Fly 752 DYDESLPSDADPDVMALQAAAVFAAGVR----------HKLSTSTLT------------------ 788
Fly 789 ---KRSKMMMP----TPLPSPTASMDHGAWETDMEFMYSRESKEEADETLSLGSTVTNSTATLGS 846
Fly 847 ISSTGSSVTGQPKDTPKDLPADQQPSVVVHPILRNICIFYSQKDPKKYSAIFYDYHLSLVHQRFM 911
Fly 912 TRIRRPAPPPPAQLATS-----NTTSLAPRSDDSGCSCEAEDSYNHQHNPT-PAIPKPLKEEWER 970
Fly 971 AV-------------------------------LAAGAV--AGKRGVAPRTGRKLRVRSNARLLL 1002
Fly 1003 ---TDSVL-AWRETLQD-VNCCEDEEDMIVPVTDILRAQQIQEDNEVQQTQQSTILQRYKSVSIG 1062
Fly 1063 NLLDLPG-------EDDKKSIKNRMRMKFAVNSNVFRINRSPKSEKKSR-------SRRGQVNSL 1113
Fly 1114 ----YLDEQKYPLFAAPLSALELNMTDHPNVPRFVVDVCAYIEQPECIEQDGLYRASGNKVLVDE 1174
Fly 1175 LRKKLTH-----VYDPRWLKTDDIHTLTSLHKQFFRELTSPLITQEAYERLGRSLNDDAAIERMS 1234
Fly 1235 LAFD---DMPEPNRSTLRFLIRHLTRVAAASASNRMPSTNLAIVWGPCLLSANQIQLDIGRM--- 1293
Fly 1294 ----NMLAKVLIENYDRIF 1308 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGAP18B | NP_573352.2 | RhoGAP | 1141..1289 | CDD:279014 | 50/155 (32%) |
arhgap12b | XP_021335715.1 | SH3_ARHGAP12 | 17..76 | CDD:213003 | |
SH3-WW_linker | 73..267 | CDD:318759 | 38/212 (18%) | ||
WW | 271..297 | CDD:306827 | 2/25 (8%) | ||
WW | 364..389 | CDD:306827 | 2/24 (8%) | ||
PH_ARHGAP9-like | 459..611 | CDD:270053 | 27/168 (16%) | ||
RhoGAP_ARHGAP27_15_12_9 | 689..875 | CDD:239868 | 58/194 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000816 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23176 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |