DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP18B and tagapa

DIOPT Version :10

Sequence 1:NP_573352.2 Gene:RhoGAP18B / 32898 FlyBaseID:FBgn0261461 Length:1317 Species:Drosophila melanogaster
Sequence 2:NP_957162.3 Gene:tagapa / 393842 ZFINID:ZDB-GENE-040426-1877 Length:621 Species:Danio rerio


Alignment Length:259 Identity:68/259 - (26%)
Similarity:116/259 - (44%) Gaps:36/259 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1062 GNLLDLPGEDDKKSIKNRMRMKFAVNSNVFRINRSPKSEKKSRSRRGQVNSLY---LDEQKYPLF 1123
            |||..:....:....:.|.|       ::||     :.:||::       .||   .:..|..||
Zfish    42 GNLASISHTGNMNINRRRWR-------SIFR-----RVQKKNK-------DLYHANSEHTKNTLF 87

  Fly  1124 AAPLSALELNMTDHPNVPRFVVDVCAYIEQPECIEQDGLYRASGNKVLVDELRKKLTHVYDPRWL 1188
            ...||  |:...| .:.|..::|:...: |.:.:..:|::|.:||...|.|::.:|....:.. |
Zfish    88 GRALS--EICQKD-GSPPEPIMDILILL-QRKGLHTEGVFRRAGNTKAVKEIKAQLNDGIEVD-L 147

  Fly  1189 KTDDIHTLTSLHKQFFRELTSPLITQEAYERLGRSL---NDDAAIERMSLAFDDMPEPNRSTLRF 1250
            |...:..|..|.|.|.|.|...|:..|.|:....::   ::|.....:.:..:.:|.||...|:.
Zfish   148 KEHPVIWLADLIKDFLRHLPGGLLMSEKYKDWMDAMEKEDEDQKCAEIKMLINTLPVPNIQLLKH 212

  Fly  1251 LIRHLTRVAAASASNRMPSTNLAIVWGPCLLSANQIQLDIGRMNMLAKV---LIENYDRIFHPD 1311
            ||..|..::..:.:|:|.|||||....|.||   |...:|.:|..:.|:   ||:|..|||..|
Zfish   213 LIVLLFLISEKADTNKMVSTNLATCVSPNLL---QTDSNIEKMEEVTKLTAFLIDNCSRIFGDD 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP18BNP_573352.2 RhoGAP 1141..1285 CDD:459875 39/146 (27%)
tagapaNP_957162.3 RhoGAP_ARHGAP20 86..273 CDD:239867 55/194 (28%)

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