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Protein Alignment RhoGAP18B and racgap1
DIOPT Version :9
Sequence 1: | NP_573352.2 |
Gene: | RhoGAP18B / 32898 |
FlyBaseID: | FBgn0261461 |
Length: | 1317 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_955925.1 |
Gene: | racgap1 / 323197 |
ZFINID: | ZDB-GENE-030131-1917 |
Length: | 654 |
Species: | Danio rerio |
Alignment Length: | 152 |
Identity: | 61/152 - (40%) |
Similarity: | 84/152 - (55%) |
Gaps: | 14/152 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 1138 PNVPRFVVDVCAYIEQPECIEQDGLYRASGNKVLVDELRKK-LTHVYDPRWLKTDDIHTLTSLHK 1201
|.:|..||.....||| ..:.:.||||.||:..:|.:|::| |.....|...|.:|||.:|.|.|
Zfish 383 PMIPSLVVHCINEIEQ-RGLHETGLYRVSGSDRVVKDLKEKFLRGKTVPLLSKVEDIHAITGLLK 446
Fly 1202 QFFRELTSPLITQEAYERLGRSL-------NDDAAIERMSLAFDDMPEPNRSTLRFLIRHLTRVA 1259
.|.|.|..||:| .||.|:. :||.:|..|.....|:|:|:|.||.|||.||.|||
Zfish 447 DFLRNLKEPLLT----FRLNRAFMDAAELSDDDNSIALMYQNISDLPQPHRDTLAFLIIHLQRVA 507
Fly 1260 AASASNRMPSTNLAIVWGPCLL 1281
.:.|: :|..||||.|:||.::
Zfish 508 QSPAT-KMDITNLARVFGPTIV 528
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
RhoGAP18B | NP_573352.2 |
RhoGAP |
1141..1289 |
CDD:279014 |
60/149 (40%) |
racgap1 | NP_955925.1 |
C1 |
310..358 |
CDD:237996 |
|
RhoGAP_MgcRacGAP |
369..562 |
CDD:239847 |
61/152 (40%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3564 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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