DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP18B and Arhgap27

DIOPT Version :9

Sequence 1:NP_573352.2 Gene:RhoGAP18B / 32898 FlyBaseID:FBgn0261461 Length:1317 Species:Drosophila melanogaster
Sequence 2:NP_942054.1 Gene:Arhgap27 / 303583 RGDID:735202 Length:869 Species:Rattus norvegicus


Alignment Length:742 Identity:169/742 - (22%)
Similarity:260/742 - (35%) Gaps:230/742 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   659 NPNTSLS---NPRQIEEEQTKPNGGKKDNLRGNSFAAENSSPEEQEEESIYQPIWQFKTIEPVDQ 720
            ||:|.::   :|.:..|..|.|...:.....|.|...|.....::|...::     |..      
  Rat   267 NPDTGVTTWESPFEAPEGATSPTTSRASVGSGESLETEWGQYWDEESGRVF-----FYN------ 320

  Fly   721 EIIEALPVEGEDE-EDEDEEDDDVDDEEEDLGDYDESLPSDADPDVMALQAAAVFAAGVRHKLST 784
                  |:.||.. |||.||.:  ||.||.|    |..||                         
  Rat   321 ------PLTGETVWEDETEELE--DDPEEQL----EMQPS------------------------- 348

  Fly   785 STLTKRSKMMMPTPLPSPTASMDHGAWETDMEFMYSRESKEEADETLSLGSTVTNSTATLGSISS 849
              |:.||......|.|           |||...:.:...:|:              .:.:||.|.
  Rat   349 --LSPRSPGQQRPPTP-----------ETDYPELLTSYPEED--------------YSPVGSFSD 386

  Fly   850 TG--SSVTGQPKDTPKDLPADQQPSVVVHPILRNICIFYSQKDPKKYSAIFYDYHLSLVHQRFMT 912
            .|  |.:...|..:.:..|..|.  :..:...:...:....::.|.|   ||:...|.|....  
  Rat   387 LGPTSPLVAPPGWSCQITPEKQM--LYTNQFTQEQWVRLEDQEGKPY---FYNPEDSSVQWEL-- 444

  Fly   913 RIRRPAPPPPAQLATSNTTSLAPRSDDSGCSCEAEDSYNHQHNPTPAIPKPLKEEWERAVLAAGA 977
                |..|.|           ||||...          :.|.:.|||...|.:|:.:        
  Rat   445 ----PQVPVP-----------APRSGRK----------SSQDSDTPAQASPPEEKIK-------- 476

  Fly   978 VAGKRGVAPRT-----GRKLR-----------------------------VRSNARLL------- 1001
            ...|.||..||     |::||                             :|..::|.       
  Rat   477 TLDKAGVLHRTKTVDKGKRLRKKHWNASWTVLEGGVLTFFKDSKTSAASGLRQPSKLSTPEYTVE 541

  Fly  1002 LTDSVLAW--RETLQDVNCCEDEEDMIVPVTDILRAQQ-----IQEDNE-VQQTQQSTILQRYKS 1058
            |..:.|:|  ::.....|..|            ||::.     ||.|:| :..|....|.:..:.
  Rat   542 LRGASLSWAPKDKSSKKNVLE------------LRSRDGSEYLIQHDSEAIISTWHKAIAEGIEE 594

  Fly  1059 VSIGNLLDLP----GEDDKKSIKNRMRM----KFAVNSNVFRINRSPKSE-----------KKSR 1104
            :|    .|||    ||.......:..|:    :..|..|....:.:|.|:           :|..
  Rat   595 LS----ADLPQREEGEPSSADFGSSERLGSWKEEDVRPNAASPSLNPGSQESDLSRVRHKLRKFL 655

  Fly  1105 SRRGQVNSL----YLDEQKYPLFAAPLSALELNMTDHPNVPRFVVDVCAYIEQPECIEQDGLYRA 1165
            .||..:.||    |:.:|   :|...|:  :|...:...|||| |..|....:...::.|||||.
  Rat   656 QRRPTLQSLREKGYIKDQ---VFGCALA--QLCERERSPVPRF-VQQCIRTVEARGLDIDGLYRI 714

  Fly  1166 SGNKVLVDELRKKLTH-----VYDPRWLKTDDIHTLTSLHKQFFRELTSPLITQEAYERLGRSLN 1225
            |||...:.:||.|:.|     :.|.||   :|:|.:|...|.|||||..||.....:.:...::.
  Rat   715 SGNLATIQKLRYKVDHDERLDLDDGRW---EDVHVITGALKLFFRELPEPLFPFSHFHQFIAAIK 776

  Fly  1226 DDAAIERMSLAFD---DMPEPNRSTLRFLIRHLTRVAAASASNRMPSTNLAIVWGPCLLSAN--- 1284
            .....:|.....|   .:|.||..|||.||:||.||......|||...|:|||:||.||...   
  Rat   777 LQDPAQRSRCVRDLVRTLPAPNHDTLRLLIQHLCRVIEHGEQNRMSVQNVAIVFGPTLLRPEMEE 841

  Fly  1285 -QIQLDIGRMNMLAKVLIENYDRIFHP 1310
             .:.:.:...|.:.::::.....||.|
  Rat   842 ASMPMTMVFQNQVVELILHQCADIFPP 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP18BNP_573352.2 RhoGAP 1141..1289 CDD:279014 56/159 (35%)
Arhgap27NP_942054.1 SH3 10..66 CDD:302595
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..137
WW 248..278 CDD:278809 3/10 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..299 4/23 (17%)
WW 301..328 CDD:278809 6/43 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..389 23/115 (20%)
WW 418..445 CDD:278809 6/35 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 447..474 11/47 (23%)
PH_ARHGAP9-like 480..594 CDD:270053 23/125 (18%)
PH 480..593 CDD:278594 23/124 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..644 10/45 (22%)
RhoGAP_ARHGAP27_15_12_9 675..861 CDD:239868 61/191 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000816
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23176
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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