DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGAP18B and rga2

DIOPT Version :10

Sequence 1:NP_573352.2 Gene:RhoGAP18B / 32898 FlyBaseID:FBgn0261461 Length:1317 Species:Drosophila melanogaster
Sequence 2:NP_594152.2 Gene:rga2 / 2542682 PomBaseID:SPAC26A3.09C Length:1229 Species:Schizosaccharomyces pombe


Alignment Length:1385 Identity:247/1385 - (17%)
Similarity:454/1385 - (32%) Gaps:481/1385 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 EVFRTQETFD-------LQRICELKLEQQQLKGSQSDQHIYGRVREPEESQSHK--RERKRPRVS 258
            |::..:|..|       .:|:.:|..:|:::        ||         :.||  .:.|:...|
pombe    18 EIWEDEEEEDNSGIVSQNERLMKLVNKQREI--------IY---------ELHKDLEKVKKDNTS 65

  Fly   259 -RIRLLQDESTSGSSSLYLNESICQWMTSLRRQVHHYDEGPWQQPKSVP------ARD-PSSSA- 314
             |:||.:.|||....|       .|...:...|...| ..|:::.|..|      ::| |::|| 
pombe    66 LRMRLSKYESTDSFPS-------SQPSRANSPQSDSY-SSPYEKGKLFPKISLKSSKDVPTASAH 122

  Fly   315 -------EESTVTL------RRSTEESAKCADEQAKLVKDFKRKLQQKRAHNVEPEREQRRCAIT 366
                   :.|:|:|      .::|:..|:..|..:.:.:. |..|..||:|. ..|.......:|
pombe   123 ISSSDHEKSSSVSLSALNNYNKTTDIKARSLDRLSDMTRP-KLLLNTKRSHR-SSEEPGASSPVT 185

  Fly   367 ANFVNDYLSALGEEKEAVQHQQVAAIEEHVAVVAIAIQPQVSVSLLRL--MQSLALSASLHVSVR 429
            :..:.|      .:||.:|..:..||:.:    :::.:....:..:|.  :..|:|:.|   |.|
pombe   186 SPILKD------SQKERIQALRNKAIKTY----SVSTESAERIDSIRSDNLSPLSLNTS---SFR 237

  Fly   430 GFLTAYDKSFSLWLWHQQQQQRQQPPINGYRRRRARDSVVGVVGDWRRRLPLFAFSFAGGNDRSV 494
            ..:|                  :..|.|                                     
pombe   238 RPIT------------------KPTPFN------------------------------------- 247

  Fly   495 ASASVSVSPAISES-----------------VDVCAAAASRRRANRST-RRRGTAIVREEGVCGG 541
            :.:::|:.|..:.|                 :|:...     |||.|: ||:..:||:..|:   
pombe   248 SDSNISIDPKDNNSNKQDHFAEIEDELRQQFLDIKVG-----RANASSPRRKSISIVKPHGI--- 304

  Fly   542 ESSTSSNNSKKNNNNNSNNNSGALMAAPKPNGEAERPSTNSNNNTINCSSNNNNDNISNNNNNHH 606
                   :|.|::.||.::.||...:..:         ..|.|..:...|..|:..|.|...|:.
pombe   305 -------SSPKHSTNNLSSKSGKFHSDFR---------VVSENVLLQARSETNSPIIENKEANNF 353

  Fly   607 TVDNESGINNNKNNDGNANCNVNEQQQQQQQQPITQNCVIKVRRPAPKVPVRNPNTSLSNPRQIE 671
            ...             .:|........:..:.|           |.|.:     ::|.:.||..:
pombe   354 LAP-------------TSNVPAYSTPARPTESP-----------PPPPI-----SSSSTTPRPDD 389

  Fly   672 EEQTKPNGGKKDNLRGNSFAAENSSPEEQEEESIYQPIWQFKTIEPVDQEIIEALPVEGEDEEDE 736
            :....|.|..:||   :|.:.:.:...:....|       |.|::..|.:|...     ....|.
pombe   390 KPSLPPRGLSEDN---DSLSLQKTGSSDTRRSS-------FSTLKIPDSDICFT-----RRRSDS 439

  Fly   737 DEEDDDVDDEEEDLGDYD--ESLPSDADPDVMALQAAAVFAAGVRHKLSTSTLTKRSKM--MMPT 797
            :.....:|.......|.|  ..:|:....:........:.:.|:.:..|..:...:||.  ..|:
pombe   440 NRTWTVIDPHHSQSFDNDILAEIPTSKLDNSSQKSPGKLSSKGLLNSFSPISPFSKSKSHNHHPS 504

  Fly   798 PLPSPTASMDHGAWETDMEFMYSRESKEEADETL-----------SLGS---------------- 835
            .....:.|...|:. ..::.:|:.:.....||:|           ||.|                
pombe   505 SQVEKSTSNSKGSM-LPLDTLYNNKLSFRLDESLVRYLRFELMKTSLASLSPDFDCIGLQFVVGV 568

  Fly   836 ------------TVTNSTATLGSISSTGSSVT---GQP--------------------------- 858
                        .|.:.|.::|...|..:|..   |.|                           
pombe   569 SASSHLASQWKDEVWSFTRSIGECRSFATSFVLDIGAPPFPTLDWFTNDSSVIQNELLRRSVDTY 633

  Fly   859 ----------------------KDTPKD-------LPAD--QQPSVVVHPI-----------LRN 881
                                  .||.::       ||.:  |:..|::..|           |::
pombe   634 FRYIFQTDLKLEQRIKLLEFLSSDTLREYLHDVFFLPPEHAQKEGVLLKYIENSGLVSRYFYLKD 698

  Fly   882 ICIFYSQ------------KDPK--KYSA---IF------------YDYHLSLVHQRFMTRIR-- 915
            ..:::::            ||.:  :|:|   ||            .:|..:.|.|...|..|  
pombe   699 NILYFAENRNSPVLGTIHLKDAQVNRYNANLPIFSIIDPPHEFLTGENYQSAFVIQEKQTETRTG 763

  Fly   916 -----------------------RPAPPPPAQLATSNTTSLAP-------------------RSD 938
                                   |..|...:.|..|..:.|:.                   ::|
pombe   764 TATVHVLLARDVEDQKSWLRAILRQVPGSTSPLNASPFSVLSSDFPGSSRYRDQSSPIRFYGKAD 828

  Fly   939 DSGCSCEAEDSYNHQHNPTPAIPKPLKEEWERAVLAAGAVAGKRGVAPR-----------TGRKL 992
            ....|.||..|.:...:|:|.:| |.:..   |..|..::.....::|:           ..|:.
pombe   829 SRPVSQEAILSQDISSSPSPVLP-PSENV---ASYADDSLVSNLTMSPKLRDSMEQVPLENHREF 889

  Fly   993 RVRSNARLLLTDSVLAWRETLQDVNCCEDEEDMIVPVTDILRAQQIQEDNEVQQTQQSTILQRYK 1057
            .:......|..||.......:.|....:|..:..|||.:|..::.     .:::|.|||.::.  
pombe   890 EISDRVSELSFDSSTGSVLEIADTRRNQDAPEKHVPVIEIQSSRP-----SLEKTDQSTPVEL-- 947

  Fly  1058 SVSIGNLLDLPGEDDKKSIKNRMRMKF--------------------AVNSNVFRINRSPKSEKK 1102
                  |:|...::.:...| |.||||                    .:.:||.   .||.|...
pombe   948 ------LIDSHSQNSQNEEK-RSRMKFWAFPHHKAENYEQISDTNIPVIETNVM---LSPSSTTS 1002

  Fly  1103 SRSRRGQVNSLYLDEQKYPLFAAPLSALELNMTDHPN---VPRFVVDVCAYIEQPECIEQDGLYR 1164
            :...:..:      .:|..:|..||:. .:|::...|   :|..|.....|:|.....:::|:||
pombe  1003 AEPLQKHI------VRKSGIFGLPLNE-AVNISTQFNDSGLPIVVYRCIEYLESCRAEKEEGIYR 1060

  Fly  1165 ASGNKVLVDELRKKLTHVYDPRWLKTD---DIHTLTSLHKQFFRELTSPLI---TQEAYERLGRS 1223
            .||:...:..|:::.....|...|.:|   |:|.:..|.|.:.|.|.:.|:   ..:.:|.|...
pombe  1061 LSGSASTIKHLKEQFNEGVDYDLLSSDEEFDVHVIAGLLKLYLRNLPTNLLDTSMHKLFELLPNV 1125

  Fly  1224 LNDDAAIERMSLAFDDMPEPNRSTLRFLIRHLTRVAAASASNRMPSTNLAIVWGPCLLSANQIQL 1288
            .||.||:..:......:|..|.:.|..|:.||.|:.|....|:|...|:.||:.|.|    .|..
pombe  1126 PNDSAALGELCDVISKLPPENFALLDSLLHHLRRIIAFEKVNKMNIRNVCIVFSPTL----NIPS 1186

  Fly  1289 DIGRMNMLAKVLIENYDRIF 1308
            ||..|      ||.|||.||
pombe  1187 DIFMM------LILNYDHIF 1200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP18BNP_573352.2 RhoGAP 1141..1285 CDD:459875 41/149 (28%)
rga2NP_594152.2 PH-like 674..787 CDD:473070 15/112 (13%)
RhoGAP_fBEM3 1016..1203 CDD:239865 57/196 (29%)

Return to query results.
Submit another query.