DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP18B and rga7

DIOPT Version :9

Sequence 1:NP_573352.2 Gene:RhoGAP18B / 32898 FlyBaseID:FBgn0261461 Length:1317 Species:Drosophila melanogaster
Sequence 2:NP_595866.1 Gene:rga7 / 2540635 PomBaseID:SPBC23G7.08c Length:695 Species:Schizosaccharomyces pombe


Alignment Length:841 Identity:170/841 - (20%)
Similarity:302/841 - (35%) Gaps:224/841 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   543 SSTSSNNSKKNNNNNSNNNSGALMAAPKP----NGEAERPSTNS--NNNTINC------------ 589
            |||:..:...:..|.::::..|::..||.    |.|......|.  .:..:.|            
pombe     7 SSTTPASPPTSPPNTTSSDDFAVLKEPKVEAILNSELGLAILNDRIKDYLLTCKELAGFFKKRSI 71

  Fly   590 ---SSNNNNDNISNN-----NNNHHTVDNESG--INNNKNNDGNANCNVNEQQQ----QQQQQPI 640
               .|..|...::.:     .:.||:..:.|.  |.:.:.::..||.::..|:.    ..|....
pombe    72 LEEESGKNLQKLAKSYLETFQSKHHSPQSFSASVITSMEIHEQLANHSLTLQKTLSAFSDQVIEF 136

  Fly   641 TQNCVIKVRRPAPKVPVRNPNTSLSNPRQIEEEQTKPNGGKKDNLRGNSFAAEN-SSPEEQEEES 704
            .:|...| |:...:...:..|..|....|:::.:::..|.:.:..|    |.:| ::.:.|::..
pombe   137 HKNAERK-RKSIKEYAKKQENAYLEAVMQMDKSKSRFKGAETEYNR----ALDNKNTGDSQKKVG 196

  Fly   705 IYQPIWQFKTIEPVDQEIIEALPVEGEDEEDEDEEDDDVDDEEEDLGDYDESLPSDADPDVM--- 766
            .::|           :...:...:|.|.....:..:.|:..:.|:..:..:.|.....|:.:   
pombe   197 FFKP-----------KSNAQLTKLEDEARLKAENAESDMHSKIENAQNVQKQLLCIHRPNYIKQF 250

  Fly   767 -ALQ---AAAVFAAGVRH-KLSTSTLTKRSKMMMPTPLPSPT-----ASMDHGAWETD-MEFMYS 820
             :||   .:::.|..:|: ||..|........:.|.. |:||     .::|:....|| ::::..
pombe   251 FSLQREIESSLIANYLRYTKLCESNTLLNGLTIRPQK-PTPTNCGLQHALDNINANTDFVQYVLH 314

  Fly   821 RESKEEADETLSLGSTVTNSTATLGSISSTGSSVTGQPKDTPKDLPADQQPSVVVHPILRNICIF 885
            ...|.|.::    ..|..:.|..:...||.|:..:....:.|            |:|.:      
pombe   315 ASIKHEDNK----NPTDASKTKIIQPPSSYGTGSSAGKTNPP------------VNPTI------ 357

  Fly   886 YSQKDPKKYSAIFYDYHLSLVHQRFMTRIRRPAP-----PPPAQLATSNTTSLA-PRSDDSGCSC 944
                  |..:||                   |:|     |.|:.....:..|.| |.|..|    
pombe   358 ------KVTAAI-------------------PSPLQNTNPAPSTFPNPSVASPAFPNSSTS---- 393

  Fly   945 EAEDSYNHQHNPT--PAIPKPLKEEWERAVLAAGAVAGKRGVAPRT-GRKLRVRSNARLLLTDSV 1006
                      ||:  ||...||            |...|...|..| |......||.|   |.|.
pombe   394 ----------NPSTAPASASPL------------ASTLKPSTANDTNGSSSSSSSNPR---TSSP 433

  Fly  1007 LAWR-ETLQDVNCCEDEEDMIVPVTDILRAQQIQEDNEVQQTQQSTILQRYKSVSIGNLLDLPGE 1070
            ||.. |....|  .:....:::|....::...||...||.....|                    
pombe   434 LASNAENKPPV--AQQSPPVLLPTLPPIQTTTIQTSREVAPPPSS-------------------- 476

  Fly  1071 DDKKSIKNRMRMKFAVNSN----VFR---INRSPKSEKKSRSRRGQVNSLYLDEQKYPLFAAPLS 1128
                           :|||    .||   ::..|.|..||.                 ||.|.|.
pombe   477 ---------------INSNRAASPFRPTSVSPQPSSPTKSL-----------------LFGARLD 509

  Fly  1129 ALELNMTDHPNVPRFVVDVCAYIEQPECIEQDGLYRASGNKVLVDELRKK-----LTHVYDPRWL 1188
            |:.|.  :|.|:|..|:...:.:|. ..:...|:||...:...|:.||.:     |..::.|...
pombe   510 AIILR--EHSNIPNIVMQCTSQVEN-FGLNLQGIYRVPSSSARVNMLRSQFENNPLLQLHTPEDY 571

  Fly  1189 KTDDIHTLTSLHKQFFRELTSPLIT---QEAYERLGRSLNDDAAIERMSLAFDDMPEPNRSTLRF 1250
            : :|:|.:..|.|.|||||..|||.   |..:...|...::....:.:..|.:|:|:.|.||:|.
pombe   572 E-NDVHAVADLLKIFFRELREPLIPDNHQRDFIDAGNVEDESRRRDAVHRAINDLPDANYSTIRH 635

  Fly  1251 LIRHLTRVAAASASNRMPSTNLAIVWGPCLLSANQIQLDIGRMNMLAKVLIENYDRIFHPD 1311
            |..||.::...|..|:|.:.||||:|||.::....|. :|...:...::||:....||..|
pombe   636 LTIHLAKIKENSDVNKMSTNNLAIIWGPTIIKQATIP-EISSFSRTIEILIDYCFTIFDYD 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP18BNP_573352.2 RhoGAP 1141..1289 CDD:279014 46/155 (30%)
rga7NP_595866.1 F-BAR_Rgd1 39..277 CDD:153336 39/253 (15%)
PRR18 335..>406 CDD:292299 24/139 (17%)
RhoGAP_fRGD1 504..692 CDD:239863 56/192 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23176
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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