DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP18B and arhgap9

DIOPT Version :9

Sequence 1:NP_573352.2 Gene:RhoGAP18B / 32898 FlyBaseID:FBgn0261461 Length:1317 Species:Drosophila melanogaster
Sequence 2:XP_005172184.2 Gene:arhgap9 / 100334461 ZFINID:ZDB-GENE-110510-2 Length:855 Species:Danio rerio


Alignment Length:1103 Identity:219/1103 - (19%)
Similarity:377/1103 - (34%) Gaps:358/1103 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 GPWQQPKSVPARDPSSSAEE--STVTLRRSTEESAKCADEQAKLVKDFKRKLQQKRAHNVEPERE 359
            |.|::...:|:...|.|...  |||.|....:.|.:.||.:...:.:.:|.|..|:.:  ....:
Zfish    15 GSWRRGTIIPSAGTSGSGSRLASTVILEAQYDYSYRGADGRLVSIHEGERFLLLKKTN--ADWWQ 77

  Fly   360 QRRCAITANFVNDYLSALGEEKEAVQHQQVAAIEEHVAVVAIAIQPQVSVSLLRLMQSLALSASL 424
            .||..:.|.....|:.|                       ...|:..||.....|..|.:.|...
Zfish    78 ARRIGMGAKVKPIYVPA-----------------------TYVIELPVSSFRTSLPNSQSASERF 119

  Fly   425 HVSVRGFL--------TAYDKSFSLWLWHQQQQQRQQPPIN---GYRRRRARDSVVGVVGDWRRR 478
            .:..||.|        :..||.|.          |....:|   ....::|..:..      |..
Zfish   120 QMISRGSLMPCMHTHGSVPDKQFC----------RSMENLNCSSALMEKQASGAAA------RAH 168

  Fly   479 LPLFAFSFAGGNDRSVASASVS-----VSPAISESVDVCAAAASRRRANRSTRRRGTAIVREEGV 538
            .|:..||       ..|||.::     :||                         |..|.|    
Zfish   169 FPMLPFS-------GSASAQLTLPGGLLSP-------------------------GAPIAR---- 197

  Fly   539 CGGESSTSSNNSKKNNNNNSNNNSGALMAAPKPNGEAERPSTNSNNNTINCSSNNNNDNISNNNN 603
                 |.||:|..:|....|:.::            |..||.:.:...:|.::..      .:.:
Zfish   198 -----SQSSSNLPQNPYQESSRST------------ACSPSRSYSQWDMNTAAPR------RHTH 239

  Fly   604 NHHTVDNESGINNNKNNDGNANCNVNEQQQQQQQQPITQNCVIKVRRPAPKVPVRNPNTSLSNPR 668
            .|..:.:.:.|:.:         :::|..::|..:|           |:| :|.:.|..:|    
Zfish   240 GHMQLSSSAYISQS---------SLSEAGRRQWSEP-----------PSP-LPGQKPLQTL---- 279

  Fly   669 QIEEEQTKPNGGKKDNLRGNSFAAENS-SPEEQEEESIYQPIWQFKTIE--PVDQEI-IEALPVE 729
            |..|:...|..|:...:  |:...|.| .|..:..::.:..  |...:.  .|.::| :.:||::
Zfish   280 QQWEQYCDPATGRCYYI--NTDTKERSWKPPRRARQTNHSQ--QVNAVHAGTVQRDIRLLSLPLQ 340

  Fly   730 GEDEEDEDEEDDDVDDEEEDLGDYDESLPSDADPDVMALQAAAVFAAGVRHKLSTSTLTKRSKMM 794
            ............|:.....|...:..|         .::|.||          |:..|:..|.|.
Zfish   341 STGSSSMHRLSPDLSYISHDANGWQLS---------QSMQRAA----------SSDALSSASSMF 386

  Fly   795 MPTP--------------------LPSPTASMDHGAWETDMEFMYSRESKEEADETLSLGSTVTN 839
            ..||                    |||...:.:   .::|...:....|.:.:.::    ..||.
Zfish   387 DDTPRRNSALSGGMAHISHSYSMILPSQRTATN---GQSDYRVVVEPPSSDSSPDS----EGVTP 444

  Fly   840 STATLGSISSTGSSVTGQPKDTPKDLPADQQPSVVVHPILRNICIFYSQKDPKKYSAIFYDYHLS 904
            .....|.::.|..:..|      :.|..:..||.||  ::.|..:|:  ||||            
Zfish   445 ELEKAGLLNKTKIAEGG------RKLRKNWNPSWVV--LVGNSLVFF--KDPK------------ 487

  Fly   905 LVHQRFMTRIRRPAPPPPAQLATSNTTSLAPRSDDSGCSCEAEDSYNHQHNPTPAIPKPLKEEWE 969
                                  :.|..|..|.:.....|.:...:               :.:| 
Zfish   488 ----------------------SQNPESWKPGNSRPESSVDLRGA---------------QLQW- 514

  Fly   970 RAVLAAGAVAGKRGVAPRTGRKLRVRSNARLLL---TDSVL-AWRETLQDVNCCEDEEDMIVPVT 1030
                 |..::.|:.|.     |||..:....||   |||:: .|..|:|:|....|:|:   |:.
Zfish   515 -----ANDLSSKKNVF-----KLRTITGNEFLLQSETDSLIREWYRTIQNVIDRLDKEN---PLD 566

  Fly  1031 DILRAQQIQEDNEVQQTQQSTILQRYKSVSIGNLLDLPGEDDKKSIKNRMRMKFAVNSNVFRINR 1095
            ::|...                |:|..||   .|||..|::|:.    |..:|.::..:...:..
Zfish   567 NVLLYS----------------LRRAGSV---ELLDHSGDEDEV----RGGIKASLPRSTSNLEN 608

  Fly  1096 SPKSEKKSRSRRGQVNSLYLDEQKYPLFAAPLSALE----------------LNMTDHPNVPRFV 1144
            |.....|||.:            |..|...||..|:                |...:...||:| 
Zfish   609 SEHKRVKSRLK------------KLILRRPPLQTLQEKGLIKDQVFGCSLELLCEREKCTVPQF- 660

  Fly  1145 VDVCAYIEQPECIEQDGLYRASGNKVLVDELRKKLTH----------------------VYDPRW 1187
            |..|....:.:.:|.||:||.|||..::.:||..:.|                      :.||:|
Zfish   661 VRKCTEAVERKGLETDGIYRVSGNLAVIQKLRFAVNHERAVTTDGRYLFPEALVQERLDLDDPQW 725

  Fly  1188 LKTDDIHTLTSLHKQFFRELTSPLITQEAYERLGRSL---NDDAAIERMSLAFDDMPEPNRSTLR 1249
               :|||.:|...|.|||||..||:...|:.....|:   :....:||:.:....:|..|:.||:
Zfish   726 ---EDIHVITGALKLFFRELPEPLVPFSAFHDFVDSIKIADHLERVERLKMLVLSLPPANQHTLQ 787

  Fly  1250 FLIRHLTRVAAASASNRMPSTNLAIVWGPCLL----SANQIQLDIGRMNMLAKVLIENYDRIF 1308
            .:||||.||...|.||||.:.|:.||:||.|:    .:..:..::...|...:.|:..|..||
Zfish   788 HMIRHLRRVMERSDSNRMSTQNIGIVFGPTLMRPENESGNMAFNMVYQNQAIETLLSQYQHIF 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP18BNP_573352.2 RhoGAP 1141..1289 CDD:279014 55/176 (31%)
arhgap9XP_005172184.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000816
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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