DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP18B and arhgap15

DIOPT Version :9

Sequence 1:NP_573352.2 Gene:RhoGAP18B / 32898 FlyBaseID:FBgn0261461 Length:1317 Species:Drosophila melanogaster
Sequence 2:NP_001122027.1 Gene:arhgap15 / 100003547 ZFINID:ZDB-GENE-070912-314 Length:465 Species:Danio rerio


Alignment Length:529 Identity:111/529 - (20%)
Similarity:196/529 - (37%) Gaps:138/529 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   837 VTNSTATLGS-ISSTGSSVTGQPKDTPKDL--------PADQQPSVVVHPILR------------ 880
            :.||.::.|. :|.|.|.|..:.:...|.:        ..:.:.||.:.|:|:            
Zfish    17 IKNSQSSTGERLSQTKSMVLPEAETLQKPINRHRRNQSQHNSEVSVGLQPVLKGEYLNKAKIAEG 81

  Fly   881 -----------------NICIFYSQKDPKKYSAIFYDYHLSLVHQRFMTRIRRPAPPPPAQL--- 925
                             |..:||  |:.|               |..::.::....|....|   
Zfish    82 GKKLRKNWTLTWVVLSSNQLLFY--KESK---------------QEAVSNLKPGGKPDGVDLNGA 129

  Fly   926 ATSNTTSLAPRSDDSGCSCEAEDSYNHQHNPTPAIPKPLKEEWERAVLAAGAVAGKRGVAPRTGR 990
            ....||..:.|.:....:......:..|.:..|.|.|     |..|:..|..:..........||
Zfish   130 VIEWTTEKSSRKNVIQITTPTGHEFLLQADHFPTISK-----WHDAIKKAVDILSSGSGGQSCGR 189

  Fly   991 KLRVRSNARLLLTDSVLAWRETLQDVNCCEDEEDMIVPVTDILRAQQIQEDNEVQQTQQSTILQR 1055
            ....|||:...|:      |.|      ||..:               .:..|.:...:.:|:.:
Zfish   190 AALHRSNSTECLS------RPT------CESSK---------------PKPKETKSEHRRSIMFK 227

  Fly  1056 YKSVSIGNLLDLPGED--DKKSIKNRMRMKFAVNSNVFRINRSPKSEKKSRSRRGQVNSLYLDEQ 1118
                     |:....|  ||..:|||:: ||        |:|.|  ..|:...:|.:        
Zfish   228 ---------LNYSASDSADKNGVKNRLK-KF--------ISRRP--SMKTLQEKGII-------- 264

  Fly  1119 KYPLFAAPLSALELNMTDHPNVPRFVVDVCAYIEQPECIEQDGLYRASGNKVLVDELR-----KK 1178
            |..:|...:  |.|...:...||:| |.:|....:...:|.||:||.|||..::.:||     ::
Zfish   265 KDRVFGCHM--LTLCDREKTTVPKF-VKLCVEEVEKRGLEADGIYRVSGNLAIIQKLRFLVDQEE 326

  Fly  1179 LTHVYDPRWLKTDDIHTLTSLHKQFFRELTSPLITQEAYERLGRSL---NDDAAIERMSLAFDDM 1240
            ...:.|.:|   :|||.:|...|.|||||..||.....::....::   .....::.|......:
Zfish   327 ELDLGDSQW---EDIHVITGALKMFFRELPEPLFPFRFFDLFVETIKIKEPTQKVQAMKKLIHQL 388

  Fly  1241 PEPNRSTLRFLIRHLTRVAAASASNRMPSTNLAIVWGPCLL----SANQIQLDIGRMNMLAKVLI 1301
            |:||.:|::.|..||.||...|..|.|.:..::||:||.|:    .:..:::::...|.:.:.::
Zfish   389 PKPNHNTMKLLFHHLRRVLTKSQKNLMSTQGVSIVFGPTLMWPEFESGNMEVNMVYQNQIVECIL 453

  Fly  1302 ENYDRIFHP 1310
            .....||.|
Zfish   454 IGCVEIFGP 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP18BNP_573352.2 RhoGAP 1141..1289 CDD:279014 46/159 (29%)
arhgap15NP_001122027.1 PH 67..175 CDD:278594 18/129 (14%)
PH_ARHGAP9-like 68..176 CDD:270053 19/129 (15%)
RhoGAP_ARHGAP27_15_12_9 269..453 CDD:239868 51/189 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000816
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23176
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.100

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