DRSC/TRiP Functional Genomics Resources

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Protein Alignment tgy and vav1

DIOPT Version :10

Sequence 1:NP_573349.4 Gene:tgy / 32896 FlyBaseID:FBgn0030984 Length:373 Species:Drosophila melanogaster
Sequence 2:XP_002940062.1 Gene:vav1 / 100497964 XenbaseID:XB-GENE-6074281 Length:844 Species:Xenopus tropicalis


Alignment Length:108 Identity:28/108 - (25%)
Similarity:43/108 - (39%) Gaps:41/108 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SSTYPGFHSSSNGLANG----MYRSAQRISTDRLVLLILLVSTTVIGLF------------AYWD 59
            |:.||     .|.||||    |: |.:..:|.:...::|.      |||            |:.:
 Frog   506 SNIYP-----DNALANGHDFQMF-SFEDTATCKACQMLLR------GLFFQGYRCCRCKAPAHKE 558

  Fly    60 VMVLNAGALPL----SRGTSSVDYMEPG-----LRNETLAEKM 93
            .:    |.:|.    ..|:|::...:||     .||||...||
 Frog   559 CL----GRVPCCGKQDSGSSTIKKQKPGRGNNNKRNETGLTKM 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tgyNP_573349.4 Galactosyl_T 103..>270 CDD:473923
vav1XP_002940062.1 CH_VAV1 2..121 CDD:409111
RhoGEF 200..373 CDD:459876
PH_Vav 387..510 CDD:269930 1/3 (33%)
C1_VAV1 512..568 CDD:410417 15/66 (23%)
SH3_VAV1_1 596..658 CDD:212912 2/2 (100%)
SH2 665..767 CDD:472789
SH3_VAV1_2 785..838 CDD:212909
Blue background indicates that the domain is not in the aligned region.

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