DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7378 and ssh1a

DIOPT Version :9

Sequence 1:NP_001285421.1 Gene:CG7378 / 32888 FlyBaseID:FBgn0030976 Length:235 Species:Drosophila melanogaster
Sequence 2:XP_009299660.1 Gene:ssh1a / 101885659 ZFINID:ZDB-GENE-040724-201 Length:1030 Species:Danio rerio


Alignment Length:163 Identity:48/163 - (29%)
Similarity:76/163 - (46%) Gaps:24/163 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VYPGIYIGDAAAAKNKTYLRLMGITHVLNAAEGCRYGQVDTGHSYYRDMPSIRRSHKDCVFRYMG 138
            ::..:|:|....|.|...|:..|:.|:||...     ::|   :::   |.        .|.|..
Zfish   321 IFDHLYLGSEWNASNLEELQESGVGHILNVTR-----EID---NFF---PG--------TFCYHN 366

  Fly   139 FPMVDAPTTDISRYFYVASKFIDSAISSGGKILVHCLVGMSRSATCVLAYLMICRKMSAVDAIRT 203
            ..:.|...||:..::.....||..|..:..|.||||.:|:||||:.|:||.|.....:...|...
Zfish   367 VRVYDDEATDLLAHWNDTYNFIVKAKKNHSKCLVHCKMGVSRSASTVIAYAMKEYGWTLEKAYNF 431

  Fly   204 VRMRRDI-RPNDGFLQQLAD----LDMELKRKN 231
            |:.:|.| |||..|::|||:    ||...:|.|
Zfish   432 VKQKRSITRPNASFMRQLAEYEGILDASKQRHN 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7378NP_001285421.1 DUSP3-like 71..227 CDD:350365 46/157 (29%)
ssh1aXP_009299660.1 SSH-N 3..246 CDD:212166
DEK_C 264..312 CDD:285919
DSPc 317..453 CDD:238073 44/150 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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