DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7378 and ssh3

DIOPT Version :9

Sequence 1:NP_001285421.1 Gene:CG7378 / 32888 FlyBaseID:FBgn0030976 Length:235 Species:Drosophila melanogaster
Sequence 2:XP_002938546.1 Gene:ssh3 / 100488263 XenbaseID:XB-GENE-5816848 Length:688 Species:Xenopus tropicalis


Alignment Length:268 Identity:69/268 - (25%)
Similarity:117/268 - (43%) Gaps:78/268 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ALLTDRYSSSIGDRYSPH----YYQS---------------------------PSRLETSEQTTG 39
            ||..:..|||     |.|    ||||                           |.|.|| |:...
 Frog   186 ALYNNVISSS-----SLHSGLIYYQSSRGSPQGCLNAWTASPDIESVRRDPATPEREET-ERIIR 244

  Fly    40 RQLQRVLHYSMAPSRALPGLRRA-----ECAIHD----VDCD------------EVYPGIYIGDA 83
            .:|:.:|..|...:.....:|.|     .||:.|    :|.:            |::|.:|:|..
 Frog   245 LKLRDILRESDLENITSKEVRSALEQHTLCALQDYKEFIDNEMIIILAQMDRPSEIFPYLYLGSE 309

  Fly    84 AAAKNKTYLRLMGITHVLNAAEGCRYGQVDTGHSYYRDMPSIRRSHKDCVFRYMGFPMVDAPTTD 148
            ..|.|...|:...::|:||...     ::|   :::.::           |:|:...::|...|:
 Frog   310 WNASNLEELQKNKVSHILNVTR-----EID---NFFPEL-----------FKYLNIRVLDEENTN 355

  Fly   149 ISRYFYVASKFIDSAISSGGKILVHCLVGMSRSATCVLAYLMICRKMSAVDAIRTVRMRRDI-RP 212
            :.:|:.....||.:....|.::||||.:|:||||:.|:||.|...:.:...|:|.|:.||:| :|
 Frog   356 LMQYWKETHAFITAGRRQGSRVLVHCKMGVSRSASTVIAYAMKEYEWTLETAMRHVKERRNIVQP 420

  Fly   213 NDGFLQQL 220
            |.||::||
 Frog   421 NAGFIRQL 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7378NP_001285421.1 DUSP3-like 71..227 CDD:350365 44/163 (27%)
ssh3XP_002938546.1 SSH-N 3..231 CDD:212166 11/49 (22%)
DEK_C 238..291 CDD:370106 12/53 (23%)
PTP_DSP_cys 294..437 CDD:391942 44/154 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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