Protein Alignment SdhBL and Sdhb

DIOPT Version :9

• Sequence 1: NP_001285420.1
• Gene: SdhBL / 32887
• FlyBaseID: FBgn0030975
• Length: 437
• Species: Drosophila melanogaster
• Sequence 2: NP_075863.2
• Gene: Sdhb / 67680
• MGIID: 1914930
• Length: 282
• Species: Mus musculus
• Alignment Length: 251
• Identity: 169/251 - (67%)
• Similarity: 204/251 - (81%)
• Gaps: 4/251 - (1%)

  Fly   175 KSAPPVKAKKPRLKTFEIYRWKP---GDQPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFRR 236
            :.|....|..||:|.|.||||.|   ||:|:.|||||||.:||.||||||||||||:|.||||||
Mouse    29 RGAQTAAAAAPRIKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRR 93

  Fly   237 SCREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQPW 301
            ||||||||||||||||.|||||...||.:.||..:||||||:||::|||||:|.||.||:||:|:
Mouse    94 SCREGICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPY 158

  Fly   302 LQRKDLKREAGTAQYLQSVDDRLVLDGLYECILCACCQTSCPSYWWNSNKYLGPAVLMQAYRWVI 366
            |::||..:| |..|||||::||..|||||||||||||.|||||||||.:||||||||||||||:|
Mouse   159 LKKKDESQE-GKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMI 222

  Fly   367 DSRDEATEQRLDFLKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQLLVGLKKK 422
            ||||:.||:||..|:||:.:||||:|||||.||||.|||.:||.::|:::...|:|
Mouse   223 DSRDDFTEERLAKLQDPFSVYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYKEK 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdhBL	NP_001285420.1	sdhB	189..417	CDD:235652	162/230 (70%)
		Fer2_3	189..293	CDD:289830	77/106 (73%)
		Fer4_8	330..403	CDD:289926	57/72 (79%)
Sdhb	NP_075863.2	sdhB	43..274	CDD:235652	162/231 (70%)
		Fer2_3	43..149	CDD:289830	76/105 (72%)
		Interaction with SDHAF1. /evidence=ECO:0000250|UniProtKB:P21912	148..220		53/72 (74%)
		Fer4_17	187..260	CDD:290268	56/72 (78%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167837196
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0479
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S140
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100664
Panther	1	1.100	-	-	O	PTHR11921
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1851
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	8	7.650