DRSC/TRiP Functional Genomics Resources

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Protein Alignment Flacc and tho2

DIOPT Version :9

Sequence 1:NP_573339.1 Gene:Flacc / 32886 FlyBaseID:FBgn0030974 Length:1150 Species:Drosophila melanogaster
Sequence 2:NP_608646.3 Gene:tho2 / 326153 FlyBaseID:FBgn0031390 Length:1642 Species:Drosophila melanogaster


Alignment Length:545 Identity:110/545 - (20%)
Similarity:199/545 - (36%) Gaps:185/545 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 IKRKL----KEARLKKRAAAALSGHVHRSLSPTTRAKLK-----KLAERKRLRA-----ASKEQR 181
            |:||:    :|.:.|:....|::......|...|...||     ::|||....:     |.....
  Fly  1211 IERKVDKVREEEKTKRPDLYAIASSYIGQLKLKTPHMLKESVFHQIAERPNKESPTSVGAPAAAT 1275

  Fly   182 ERDKLRVVQRDRERDHHRLGSSRSP------------PSSSTTTTTKIRIHQDIVGKRQKSPGLG 234
            ..|||............|.....:|            |.:...:||:       ..|.|:  |.|
  Fly  1276 RSDKLSPTSPSGNTQGTRAPGGAAPFYNSEQKSVIKEPDAKAASTTR-------ESKSQR--GEG 1331

  Fly   235 SGLGGGSSSSSSRMHHQLMSREKIIIQTR-ARGRTPSLERER-------ERERE-RERERERERH 290
            :.:...|:::|:..:::..|:::.:...| ::.|:...::|:       .|:.| |.|:.||:||
  Fly  1332 NNVTLVSTATSTASNNERESKQRDLPAPRESQSRSKDDQQEQANNGSNGSRQSESRNRDVERDRH 1396

  Fly   291 DLSLRERDRRDRERERAEREAARDKERAEALARCQERQRERERLAREKLRRQEEEEGGKRGGPGR 355
            |    ::|:|.....|:.|:..|.|||.||         |..:.:||:.:|.||.|.        
  Fly  1397 D----QQDQRSISSHRSSRDIVRVKERTEA---------ELHQRSRERSQRLEELEA-------- 1440

  Fly   356 DLDLPPYGSRERSLDTVERERERERSGRHVRDKRELDPYEREQEYLEERHGHGL--ID-----EM 413
                              ::|:||::.|...::|             .|||.|:  :|     :.
  Fly  1441 ------------------QQRKREKTSRRGGEER-------------IRHGDGVETVDLVGSTDN 1474

  Fly   414 RRYRRRDLSPMPEHYAPRLRDPRELYSE-----EERERAYKRAYLDARYSSREREAWLEARELRE 473
            |.|         |.:..|:||...:.:|     ..|:|:::....:...|.|             
  Fly  1475 RHY---------EEFEGRMRDLSSVSNESNGSLHHRQRSHETIEFEKVDSKR------------- 1517

  Fly   474 RELQGREYRDLETEDTLYPDERERLIRDRERDRER----ERDRERERNIGPRGDFRPEWEREWEE 534
            |:|:.......:.|:.:...::.|.::.:||::::    |||..::|.:|.:.|...|       
  Fly  1518 RKLESSTSSSKKVEELVDSVKKARALKTKERNKDKLSDEERDARKDRKLGRKRDRVDE------- 1575

  Fly   535 EGAGGGPGGPSGTPGRPGGFVGGPKRGKPPAHAGGGPPSQQQHHSASEPDWDADERERERERERD 599
                                                  |....|.......:.:|..|:|||.|:
  Fly  1576 --------------------------------------SNSNEHKRRREGQNGEEELRDRERHRE 1602

  Fly   600 ---RERERDREDRPDTGGGGAGGDR 621
               |||..::.||.   .|||.|.|
  Fly  1603 KSPRERSHEKFDRE---RGGASGSR 1624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FlaccNP_573339.1 None
tho2NP_608646.3 THOC2_N 133..627 CDD:292752
Thoc2 629..703 CDD:288568
Tho2 939..1240 CDD:288156 6/28 (21%)
PRP38_assoc 1570..1639 CDD:289628 20/103 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1874
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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