DRSC/TRiP Functional Genomics Resources

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Protein Alignment Flacc and zc3h13

DIOPT Version :9

Sequence 1:NP_573339.1 Gene:Flacc / 32886 FlyBaseID:FBgn0030974 Length:1150 Species:Drosophila melanogaster
Sequence 2:XP_031752992.1 Gene:zc3h13 / 100124805 XenbaseID:XB-GENE-5798641 Length:1675 Species:Xenopus tropicalis


Alignment Length:1379 Identity:312/1379 - (22%)
Similarity:489/1379 - (35%) Gaps:371/1379 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SLRRYKKAARHSATHSSSSDSTSDSDS---GSSSYSSTDSEQGVGGVGVGVGVPGGAGGPGGSGS 69
            |::|:..:.||..:.|.|...|:...:   .:|.|::..|..           |.....|    |
 Frog   399 SVQRHSPSPRHRRSPSPSYQRTASPTTRRQSTSPYATRASSS-----------PHRKRSP----S 448

  Fly    70 VHGHPHTHGHGHHPR-----SAERHHRKKKSSRRGGSSSGD------------EPSSSRRKRDKR 117
            .|..| ....|.|.|     |.:|.|.::..||  |....|            |||.||..||.|
 Frog   449 KHRSP-AREKGRHDRERTSASQDRRHERRDESR--GRKDKDRERDERDRDHDREPSGSRDHRDDR 510

  Fly   118 DHVQKKLVAKRNHIKRKLKEARLKKRAAAALSGHVHRSLSPTTRAKLKKLAERKRLRAASKEQRE 182
            :       ::....:|::::.|.::....:......|........|..:..:..|....:.|.|:
 Frog   511 E-------SREGRDRREVRDNRDRREPRDSRDSRETRDSREYRDVKESRDQKDSRSTRDAHEYRD 568

  Fly   183 RDKLRVVQRDRE------RDHHRLGSSRSPPSSSTTTTTKIRIHQDIVGKRQ-------KSPGLG 234
            ||.....::|.:      |:|.|..:||:...:.|...::.....|....|.       ..|...
 Frog   569 RDNRESHRKDEQYDERSYRNHGRDDTSRAESRNETRNDSRNENRSDTRNDRNGRTRGRAPDPPEK 633

  Fly   235 SGLGGGSS-----SSSSRMHHQLMSR----EKIIIQTRARGRTPSLE--------RERER----- 277
            :|....||     ||||..|....||    |:....:|.:||..|.:        |:|:|     
 Frog   634 AGRAARSSQADNHSSSSNYHDNWESRSSYTERDRYDSRDQGRDSSFDRRHGDRDRRDRDRDQRPT 698

  Fly   278 ------------ERERERERER-----ERHDLSLRERDR-RDRERERAEREAARDKERAEALARC 324
                        |||..||..|     ||.|...|||:| |:|||||.:||..|:|||.....|.
 Frog   699 SPVRHQGRSDDTEREERREERRVDRTDERRDERARERERDREREREREQREREREKERESERERV 763

  Fly   325 QERQRERER-----LAREKLRRQEEEEGGKRGGPGRDLDLPPYGSRERSLDTVERERERERS--- 381
            :||:|||||     ..|||.|.:|.||..:.    |:.:......|||..|. ||||||||.   
 Frog   764 REREREREREKDREREREKEREREREERERE----RERERERERERERDRDR-EREREREREREK 823

  Fly   382 ----GRH------------------VRDKRELDPYEREQEYLEERH------------GHGLIDE 412
                ||.                  .||||| |..|.::|..|:|.            ...|..:
 Frog   824 DRERGRERERDRPRDWEEKEKTREDRRDKRE-DVREEKRETHEDRKPKSEKGKIEGQINQNLHKD 887

  Fly   413 MRRYRRRDLSPMPEHYAPRLRD---PRELYS----EEERERAYKRAY--LDAR-----YSSRERE 463
            .|:..|.:.||.|.....|.|:   ..:.|:    :.|:.|...:..  ||.|     :.:.||:
 Frog   888 QRKRHRNESSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVKPLDTRSLSPAHVNEERQ 952

  Fly   464 A-WLEARELRERELQGREYRDLETEDTLYP---DERERLIRDRERDRERERD-----RERERNIG 519
            : |.|.....||:...|.|.:.||::...|   .:||.|....|..:.::.|     :..||:|.
 Frog   953 SRWKEEERKSERKESSRRYEESETKERAVPAAEKQREHLAEPSENSKVKDLDTVVQHKAEERDIS 1017

  Fly   520 --------PRGDFRPEWEREWEEEGAGGGPGGPSGTPGRPGGF-VGGPKRGKPPAHAGGGPPSQQ 575
                    .:...:.:..::.:|:..|   ...|.|..:.... |..||:|:.       ..|.:
 Frog  1018 EKLHDDKTKKTKLQKKAAKKKKEDEVG---TEKSTTESQSDDVQVFSPKKGQK-------KKSVE 1072

  Fly   576 QHHSASEPDWD-ADERERERERERDRERERDREDRPDTGGGGAGGDRPSIKNEPAWLEHDQR--- 636
            :....|:.|.| :||...:..:::...|.......|.:...       .||.|...:..:::   
 Frog  1073 KKRKKSKGDSDVSDEEVVQPSKKKKGPRTPPATVAPVSVAA-------PIKEEVVEVLPEKKVVE 1130

  Fly   637 EKPRGWQQQSSNSGGDWRDNDDAP----PAP---SHPHPASPHHHVHPRGERGSGRGFRRGGHGH 694
            :|.....|:...:..||.| :|.|    |.|   |...|......|....|.             
 Frog  1131 KKVVEVSQEKETAFSDWSD-EDVPERKEPVPLEKSIEEPIKKPSKVKVEKEE------------- 1181

  Fly   695 GDHGERPGYRSHPPPLMTLPVQP------PGGYSRGFPHKRLP-----YGSGRDGAALGARDGGL 748
                .||.....|||  ..|.:.      ....||.....|.|     :.||.|.   .||...|
 Frog  1182 ----PRPAAAEEPPP--RKPTEQKRSSSISSNQSRTSSRLRSPSIDSVHRSGEDH---NARRRLL 1237

  Fly   749 PGSSTFLKKHTHAPLVSPT-QTPLLNPLLNAAKPNAAAQASAVAAATTAVAAAKAAAQSAANATT 812
            .|||   :.......:.|| :.......|...:|:.:..:.            :..::|.::..:
 Frog  1238 HGSS---RDRDRNKSIEPTGERKSRIDQLKRGEPSRSTSSD------------RQDSRSHSSRRS 1287

  Fly   813 NPGILAQVSKLNTVCIKQEDASE------------DSAGTPELGAQ------------------- 846
            :|....||...:.....:|.|||            |......:|.|                   
 Frog  1288 SPESDRQVHSRSGSFDSRERASERERYEYERERDKDRERERRVGRQREWDREADKEWPRTRDRDR 1352

  Fly   847 --------------DSPTQSLNLNQSLSSE-----GNPVKQELIRTSAVEGELSEISDSDDDILN 892
                          |...:.: |..|...|     ..|...|..||...|.:|.:..|:....::
 Frog  1353 IRERERERDRRSDIDREREKV-LPDSTEKERVRLLDMPPIAEPKRTDLKERDLDKNYDNSSRNIS 1416

  Fly   893 KTDKV--RPK------NELPTETEQEMDTNADE----VKSEALHIVAG---HPIKGEEGDEVL-- 940
            ..||:  .|:      |...||..:..|...||    ...::...|||   .||..:|.||:|  
 Frog  1417 AVDKIDRNPENSQDISNSRKTEKPESFDGGDDEEPKLEDDQSGDSVAGEEYEPISDDELDEILAD 1481

  Fly   941 DFEEISDGELEEDARHKGIGDALGVDWQGLIAETRQQASDAQAAQQGVDRGTSAKQRWQPYRVLL 1005
            |.|:..|.:.::|.....: |.:.|||..|:.:..::..::.|          |..::.|..:||
 Frog  1482 DAEKKEDHQQDDDKPSDPL-DVIDVDWSSLMPKQPKEPRESGA----------ALLKFTPAALLL 1535

  Fly  1006 DLGISFGMAGEGYARCVMEEARQQLLQEKEQGQQRELDGDEEPPAKIPSPLLDYREFLASQQQLE 1070
            .:|||..:||......|.:..:|.|.:.|:.....|.|                           
 Frog  1536 RVGISKRLAGPELFNKVKDLCQQSLEKPKDTETLFEHD--------------------------- 1573

  Fly  1071 PLACVQMGLRSAAVERQRLVGNVCGPGSRALSARQDLRLRRQLC----GLPARECEFPRSVPIVG 1131
             |..:.|.......||..|:.|: ||..:||.:|:||.:|:||.    |...:....|   |:|.
 Frog  1574 -LGALNMAALLRKQERAGLLSNL-GPCCKALCSRRDLAIRKQLVQNEKGTVKQTYSNP---PVVD 1633

  Fly  1132 EGLRNLAMQMFQRR 1145
            ..|..|::::|:|:
 Frog  1634 SELLRLSLRLFKRK 1647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FlaccNP_573339.1 None
zc3h13XP_031752992.1 zf-CCCH 42..63 CDD:395517
PTZ00108 <120..374 CDD:240271
PHA03307 298..>472 CDD:223039 19/88 (22%)
PRK12678 406..>624 CDD:237171 49/242 (20%)
ECM1 1091..>1242 CDD:399061 37/183 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 160 1.000 Domainoid score I4018
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 160 1.000 Inparanoid score I4145
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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