DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7332 and Mindy4b

DIOPT Version :9

Sequence 1:NP_001285417.1 Gene:CG7332 / 32885 FlyBaseID:FBgn0030973 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_038959839.1 Gene:Mindy4b / 108350017 RGDID:11362385 Length:484 Species:Rattus norvegicus


Alignment Length:574 Identity:126/574 - (21%)
Similarity:218/574 - (37%) Gaps:184/574 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ASASTASMTFASA----------ALESHKTTTITTASS--SPRTSGASASAS-------SSSRSA 73
            |.|.|.|:...|:          ..::|..|.....|.  :..|.|.|..:.       |||...
  Rat    40 AQAVTLSLVAPSSNTHIKQHNLRLFDTHNVTQNHDGSHRFAEETGGGSRMSPSQGQRQLSSSGVC 104

  Fly    74 SAP--ASSSSQQEKQPMLNATDMRELREIKQLLWGDNVREDVFKRWSQG-FEFSKVEP-----SA 130
            |.|  |..||:....|:..|  |..:  :::.|:| |..:.:...|.:. |:|.  :|     .|
  Rat   105 SIPRLAVISSKLHGFPISPA--MATM--LQRSLFG-NTNQVLGSDWRKAHFKFH--DPFSDLAFA 162

  Fly   131 LVQKQGGPCAVIAPVQAYLLKIIIMDLPGIKLSEISLDKSQNLLIQALCDILKNCRAPRYRIVHL 195
            |..::||..::...||..::|.::....|           ::..:.:||::.:.           
  Rat   163 LQVEKGGAQSIQMAVQGSIIKYLLFAREG-----------KDCSLHSLCNLSQR----------- 205

  Fly   196 LRRRGNATEAGSTKKRSPAGEEESALAGQAAGSSEEVEEAAEATPASVSKLSQALQLEHDMHQ-- 258
                                |:|.|||...||.......|.:|....|:|         |:|.  
  Rat   206 --------------------EQEQALAAVLAGILWAAGTAQKAIVCFVTK---------DIHSTS 241

  Fly   259 --ELSPDEFHERLHTLHFKNIAAVARYYMENYDQLAH-----TYGVLLFMYSVFLTKGLELVAAD 316
              :.|.|.|.|||....|....|..::.   ||.|..     ::||:||:||:.|::..|.:..|
  Rat   242 TLDCSRDNFIERLQLFEFSEKEATEKFV---YDHLQRFQGEGSHGVILFLYSLVLSRTFERLQKD 303

  Fly   317 ISDTSEPLIHSTYGYGG----QSLINLMLTGRAVAHVWDN-EQDVGGLKLRGICEQSDIGFITLM 376
            :..|:..|:.|.  .||    |:::|::|||||..:|::. |:......|.|:..:||:|::...
  Rat   304 LDSTTTHLLQSQ--AGGILCRQAVLNMILTGRASPNVFNGYEEGRSEGALHGVLTRSDVGYLQWS 366

  Fly   377 EEM----RYCTVGSFFKNPRYPVWVMGSDTHLTVLFSNEKRLVSPETPSETGRRIFKSYDPEGNN 437
            ::.    :...|||..|.|.:|:|:...:.:.::||...::|:| :...|   |:|..:...|  
  Rat   367 KDTAEGDQLSQVGSRLKTPVFPIWLCNINGNYSILFCTNRQLLS-DWKME---RVFDLHFYSG-- 425

  Fly   438 FISTTMLREVLIALNLVSEPAYVALMQKRLDPENLGIILLNAFMDEFFPLESRSTPDT----FEL 498
                              :|:     |:|  |.:|                   |.||    :|.
  Rat   426 ------------------QPS-----QQR--PVHL-------------------TIDTHSHQWER 446

  Fly   499 MHYNGIPGSNENNKVRYYCGTAILLEGDLKSVCTSNPMVTCLQTKWPNIEINWH 552
            .|:....||.     |.:....:|                 ::|||....|||:
  Rat   447 GHHEDKRGSG-----RRFSSLEML-----------------IRTKWREATINWN 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7332NP_001285417.1 DUF4205 101..>416 CDD:290609 79/338 (23%)
Mindy4bXP_038959839.1 DUF4205 130..479 CDD:404737 104/480 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1276386at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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