DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp39 and SAD1

DIOPT Version :9

Sequence 1:NP_573334.1 Gene:Usp39 / 32881 FlyBaseID:FBgn0030969 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_116660.1 Gene:SAD1 / 850555 SGDID:S000001901 Length:448 Species:Saccharomyces cerevisiae


Alignment Length:501 Identity:150/501 - (29%)
Similarity:239/501 - (47%) Gaps:91/501 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KLEKTPANPVEEDETPSVFNPKYRVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQ 77
            :|::.....::..|      |.|   .||:|:.|..||||.||:|.|:|:.:|||.|||||.|:|
Yeast    13 ELKQEAVKKIKSQE------PNY---AYLETVVREKLDFDSEKICCITLSPLNVYCCLVCGHYYQ 68

  Fly    78 GRGTNTHAYTHSVGEAHHVFLNLHTLRFYCLPDNYEIIDSS----LDDIKYVLNPTFTRQEISKL 138
            ||...:.|:.||:.|.|||||||.:|:||.||.|.:|:...    |:.||:...||:..:::...
Yeast    69 GRHEKSPAFIHSIDENHHVFLNLTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCPKDLEDF 133

  Fly   139 DQLQPKHSRTVDGVLYLPGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVVRPPGDS 203
                |:....:....||.|.:|..|....||.:.||..:||:.|:||:||....         |:
Yeast   134 ----PRQCFDLSNRTYLNGFIGFTNAATYDYAHSVLLLISHMVPVRDHFLLNHF---------DN 185

  Fly   204 VFTLVQRFGELMRKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQG---DPID---FLSWFLN 262
            ....::|....::|:|:|:.||.|:|..:.:.         :....:|   :|||   ||.|..|
Yeast   186 QGEFIKRLSICVKKIWSPKLFKHHLSVDDFVS---------YLKVREGLNLNPIDPRLFLLWLFN 241

  Fly   263 TLHRALKGNKHPNSSILYKIFLGEMKIYTRKMPPVELDDAAKAQLLATEEYKDQVEDKNFIYLTC 327
            .:..:....|    |||.....|::||...:..|.           |:|....:|..|.|..||.
Yeast   242 KICSSSNDLK----SILNHSCKGKVKIAKVENKPE-----------ASESVTGKVIVKPFWVLTL 291

  Fly   328 DLPPPPLFTDEFRENIIPQVNLYQLLSKFNGTAEKEYKTYKANFMKRFEITRLPQFIILYIKRFT 392
            |||....|.|....:.:||:|:.:||:||..:......|.       ||:||||||:|.:..||.
Yeast   292 DLPEFSPFEDGNSVDDLPQINITKLLTKFTKSRSSSTSTV-------FELTRLPQFLIFHFNRFD 349

  Fly   393 KNTF--FLEKNPTIVNFPIKHVDFGDILGMRQRDKDVKDTKYNLVANIVH--------DGDPKKG 447
            :|:.  ...:|.|:|.|              ..:.::...||.|.||:||        ||:...|
Yeast   350 RNSDHPVKNRNQTLVEF--------------SSELEILHVKYRLKANVVHVVIKQPSTDGNAFNG 400

  Fly   448 TYRAH----ILHKANGQWYEMQDLHVTEILPQMITLTESYIQIYER 489
            ..::|    :....:.:|.|:..::.||...:::.|.|::||::|:
Yeast   401 DEKSHWITQLYDNKSEKWIEIDGINTTEREAELLFLKETFIQVWEK 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp39NP_573334.1 Peptidase_C19M 39..488 CDD:239134 145/472 (31%)
UCH 158..487 CDD:278850 93/348 (27%)
SAD1NP_116660.1 Peptidase_C19M 30..445 CDD:239134 145/472 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I2237
eggNOG 1 0.900 - - E1_KOG2026
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I808
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54751
OrthoFinder 1 1.000 - - FOG0003552
OrthoInspector 1 1.000 - - oto99451
orthoMCL 1 0.900 - - OOG6_102786
Panther 1 1.100 - - LDO PTHR21646
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1590
SonicParanoid 1 1.000 - - X2428
TreeFam 1 0.960 - -
1312.860

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