DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp39 and AT4G22285

DIOPT Version :10

Sequence 1:NP_573334.1 Gene:Usp39 / 32881 FlyBaseID:FBgn0030969 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001078426.1 Gene:AT4G22285 / 5008155 AraportID:AT4G22285 Length:541 Species:Arabidopsis thaliana


Alignment Length:492 Identity:231/492 - (46%)
Similarity:320/492 - (65%) Gaps:45/492 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KLEKTPANPVEEDETPSVFNPK---------YRVCPYLDTINRNLLDFDFEKLCSISLTRINVYA 68
            |::......|::||...|...|         .|.||||||:||.:||||||:.||:||:.:||||
plant    77 KVKGEAQEEVDDDEDDDVSKGKGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVYA 141

  Fly    69 CLVCGKYFQGRGTNTHAYTHSVGEAHHVFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQ 133
            |||||||||||...:||||||:...|||::||.|.:.|||||:|||.|.|||||::||||.|:|.
plant   142 CLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLDDIRHVLNPRFSRA 206

  Fly   134 EISKLDQLQPKHSRTVDGVLYLPGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVVR 198
            ::::||: ..:.||.:||..||||:||||||:..::.||.:.:|..|.|||::||..::|.|...
plant   207 QVNELDK-NRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRVTPLRNFFLIPENYQHCKS 270

  Fly   199 PPGDSVFTLVQRFGELMRKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNT 263
            |       ||.|||||.||:|:.||||..|||||.||||:..|.|||:|.:|.||::|:||.|||
plant   271 P-------LVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNT 328

  Fly   264 LHRALKGNKHPNSSILYKIFLGEMKIYTRKMPPVELDDAAKAQLLATEEYK----DQVEDKNFIY 324
            ||..|:.:|.. |||::|.|.||:::                    .:|::    .::...:|:.
plant   329 LHMDLRTSKDA-SSIIHKCFQGELEV--------------------VKEFQGNENKEISRMSFLM 372

  Fly   325 LTCDLPPPPLFTDEFRENIIPQVNLYQLLSKFNGTAEKEYKTYKANFMKRFEITRLPQFIILYIK 389
            |..||||||||.|...:||||||.|:.||.||:|....|....|...| |:.:.:.|::::.::.
plant   373 LGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEVVRPKLARM-RYRVIKSPRYLMFHMV 436

  Fly   390 RFTKNTFFLEKNPTIVNFPIKHVDFGDILGMRQRDKDVKD--TKYNLVANIVHDGDPKKGTYRAH 452
            ||.||.||.|||||:||||:|.::..|.:....|..:.::  :||||:|||||||.|:.|.:|..
plant   437 RFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGENVCSKYNLIANIVHDGKPEDGYFRVF 501

  Fly   453 ILHKANGQWYEMQDLHVTEILPQMITLTESYIQIYER 489
            :..|:...|||||||||.|.||||:.|:|:|:||||:
plant   502 VQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQ 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp39NP_573334.1 Peptidase_C19M 39..488 CDD:239134 221/454 (49%)
AT4G22285NP_001078426.1 Peptidase_C19M 112..537 CDD:239134 221/454 (49%)

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