Protein Alignment Usp39 and Usp50

DIOPT Version :10

• Sequence 1: NP_573334.1
• Gene: Usp39 / 32881
• FlyBaseID: FBgn0030969
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001417364.1
• Gene: Usp50 / 311399
• RGDID: 1564751
• Length: 385
• Species: Rattus norvegicus
• Alignment Length: 377
• Identity: 98/377 - (25%)
• Similarity: 146/377 - (38%)
• Gaps: 38/377 - (10%)

  Fly   124 YVLNPTFTRQEISKLDQLQPKHSRTVDGVLYLPGVVGLNNIKANDYCNVVLHALSHVGPLRDYFL 188
            |:|      .|.:..|.|....::.     :..||.||.|:....|.|.:|..|....||.:|||
  Rat    16 YIL------AECADYDSLPESETQP-----HFQGVTGLRNLGNTCYMNAILQCLCSTSPLVEYFL 69

  Fly   189 QKQSYAHVVRPPGDSVFTLVQRFGELMRKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDP 253
            ..: |...::.....|.|   .|..||..||  ......|||...|.||........:.|:| |.
  Rat    70 SGK-YITALQKDCSEVTT---AFAYLMTDMW--LGDSDCVSPEIFLSAVGSLYPAFLKKTQQ-DA 127

  Fly   254 IDFLSWFLNTLHRALK-------GNKHPNSSILYKIFLGEMKIYTRKMPPVELDDAAKAQLLATE 311
            .:||.:.||.||.|||       ..|....:...|:...|..|.||.... :|..:.......|.
  Rat   128 QEFLIYVLNELHEALKKHCRGRASEKRTAQNCCRKVPAHETSIITRLFEG-QLSYSITCLKCETC 191

  Fly   312 EYKDQVEDKNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLSKFNGTAEKEYKTYKANFMKRFE 376
            .||::|      :....||.|..:....::.:  |....|....:|......:...|.....|..
  Rat   192 TYKNEV------FTILSLPIPSEYECSLQDCL--QCFFQQDTLTWNNQIHCSFCEIKQETAVRTT 248

  Fly   377 ITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKHVDFGDILGMRQRDKDVKDTKYNLVANIVHD 441
            |::.|:.|:|::|||.......:|..|.:::|:.::|....:....|    |..||||.|.:.|.
  Rat   249 ISKAPKIIVLHLKRFDIQGAVKKKLRTDIHYPLTNLDLTPYICPVFR----KHPKYNLCAVVNHF 309

  Fly   442 GDPKKGTYRAHILHKANGQWYEMQDLHVTEILPQMITLTESYIQIYERCPNS 493
            ||...|.|.|...:.....||...|..|:||....:....:|:..|...|.|
  Rat   310 GDLDGGHYTAFCKNSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFYSCQPFS 361

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp39	NP_573334.1	Peptidase_C19M	39..488	CDD:239134	95/370 (26%)
Usp50	NP_001417364.1	None