DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7322 and SPCC24B10.20

DIOPT Version :9

Sequence 1:NP_001259693.1 Gene:CG7322 / 32880 FlyBaseID:FBgn0030968 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_588023.1 Gene:SPCC24B10.20 / 2538958 PomBaseID:SPCC24B10.20 Length:254 Species:Schizosaccharomyces pombe


Alignment Length:197 Identity:59/197 - (29%)
Similarity:102/197 - (51%) Gaps:25/197 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GKVILVTGAGAGIGQALVKQLAS-AGATVIAVARKPEQLQQLVAFDPVH--IQPLQLDLSGWQAV 68
            |.|.::.|...|||.:|||:|:: .|.||.|.||.|....:|..:...|  :..::||::..::.
pombe     6 GIVYVIVGGNRGIGLSLVKELSNKEGVTVFASARGPGSASELKDWSKTHSNVHIIKLDVTSLRSA 70

  Fly    69 REGLAK----VPLLDGLVNNAGVA-----IIKPFEELTEQDFDTHFDVNIKAVFNVTQSLLPRLK 124
            ::...:    |..:|.|..|:|::     ::|..:||    :.:|:..|:....:|.|:....||
pombe    71 KDAAMQVEKVVKCIDVLWVNSGISKSFQPVLKTSDEL----WMSHYQTNVLGPIHVYQAFYHLLK 131

  Fly   125 DG--ASIVNVSSIASSRSFGG-----HTAYSATKAALDSLTKSLALELGPRKIRVNSVNPTVVLT 182
            :|  .:||..||:|:  ..||     ::||..:||||:...|.::.||......|.|::|.||.|
pombe   132 EGKLKNIVFTSSMAA--CMGGVRPNTYSAYGQSKAALNYTMKEISFELEKDGFVVVSIHPGVVNT 194

  Fly   183 KM 184
            .|
pombe   195 DM 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7322NP_001259693.1 XR_like_SDR_c 1..242 CDD:187609 59/197 (30%)
SPCC24B10.20NP_588023.1 carb_red_sniffer_like_SDR_c 9..254 CDD:187586 57/194 (29%)
adh_short 10..199 CDD:278532 57/193 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.