DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment shop and SOX

DIOPT Version :9

Sequence 1:	NP_573331.1	Gene:	shop / 32878	FlyBaseID:	FBgn0030966	Length:	573	Species:	Drosophila melanogaster
Sequence 2:	NP_186840.1	Gene:	SOX / 820118	AraportID:	AT3G01910	Length:	393	Species:	Arabidopsis thaliana

Alignment Length:	395	Identity:	173/395 - (43%)
Similarity:	240/395 - (60%)	Gaps:	35/395 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly   199 SPWSQEPQRHALLKPASKRPFNAEPPIGLLAEQFYTPNELFYVRNHLPVPVINP-EDYELEIEGG 262
            |.:||||.||..||..:|.|||||||...|...:.||.:|||.|||.|:|:::. :.|.:.:.|.
plant     8 SEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVDHLQSYSVTLTGL 72

  Fly   263 AKD-KTLTLDGIKALPKHSVTAAIMCGGNRRSEMTKVKAVKGLSWGAGAVGNAKWSGARLCDILR 326
            .:: :.|.:..|::|||::|||.:.|.||||:.|:||:.|:|:.|...|:|||.|.||:|.|:|.
plant    73 IQNPRKLFIKDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLE 137

  Fly   327 EQGVQPDET-------KHVIFEGAD--LDPTSHPYGASIPLAKALDPRGDVILAYEMNDEPLSRD 382
            ..|: |..|       :||.|...|  .:....||.|||.|::|.:|..||:||||||.|.|:||
plant   138 LVGI-PKLTASTNLGARHVEFVSVDRCKEENGGPYKASITLSQATNPEADVLLAYEMNGETLNRD 201

  Fly   383 HGFPIRVIVPGTVGARNVKWLTRIVVADKESDSHWQQNDYKGFSPSTDWDTVDFSKSDAIQAMPV 447
            ||||:||:|||.:|||:||||..|.|..:||...:.|.|||.|.||.:||.:::|........||
plant   202 HGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQKDYKMFPPSVNWDNINWSSRRPQMDFPV 266

  Fly   448 TSAICTPQPGARVKVDDDEGHITVRGYAWSGGGRKIVRVDLTNDEGVSWHVAELEQEEMPDGRHY 512
            .||||:.:....||    .|.::::|||.|||||.|.|||::.|.|.:|..|...||   .|:.|
plant   267 QSAICSVEDVQMVK----PGKVSIKGYAVSGGGRGIERVDISLDGGKNWVEASRTQE---PGKQY 324

  Fly   513 ----------GWSLWTARLPVSEAQRRAGDVEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHK 567
                      .|.|:.|.:.||:.      .|:.|||||||.|||||..|.:|||||||..::|:
plant   325 ISEHSSSDKWAWVLFEATIDVSQT------TEVIAKAVDSAANVQPENVESVWNLRGVLNTSWHR 383

  Fly   568 VKVKI 572
            |.:::
plant   384 VLLRL 388

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
shop	NP_573331.1	Cyt-b5	110..185	CDD:278597
		PLN00177	199..572	CDD:177772	173/393 (44%)
		eukary_SO_Moco	211..572	CDD:239029	166/381 (44%)
SOX	NP_186840.1	PLN00177	1..393	CDD:177772	173/395 (44%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	155	1.000	Domainoid score	I1344
eggNOG	1	0.900	-	-		E1_COG2041
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H394
Inparanoid	1	1.050	314	1.000	Inparanoid score	I729
OMA	1	1.010	-	-		QHG63137
OrthoDB	1	1.010	-	-		D804989at2759
OrthoFinder	1	1.000	-	-		FOG0004792
OrthoInspector	1	1.000	-	-		oto3495
orthoMCL	1	0.900	-	-		OOG6_100179
Panther	1	1.100	-	-	LDO	PTHR19372
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3942
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	15	14.840