DRSC/TRiP Functional Genomics Resources

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Protein Alignment shop and cyb5r2

DIOPT Version :9

Sequence 1:NP_573331.1 Gene:shop / 32878 FlyBaseID:FBgn0030966 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001038825.1 Gene:cyb5r2 / 751641 ZFINID:ZDB-GENE-060825-83 Length:309 Species:Danio rerio


Alignment Length:199 Identity:38/199 - (19%)
Similarity:67/199 - (33%) Gaps:54/199 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 GSPWSQEPQRHALLKPASKRPFNAEPPIGLLAEQFYTP-------------NELFYVRNHLPVPV 249
            |.|.|.    |.|..|..:..:.:....|.|..:.|||             .:::|...|...| 
Zfish    71 GLPSSS----HVLGLPIGQHIYLSAKVNGSLVVRAYTPVSSDQDQGYVDLVVKVYYKNTHPSYP- 130

  Fly   250 INPEDYELEIEGGAKDKTL-------TLD--GIKALPKHSVTAAIMCGGNRRSEMTKVKAVKGLS 305
                      :||...:.|       |:|  |...|..::.........:::|| .:|:..|.::
Zfish   131 ----------DGGKMSQYLDNMKIGDTIDFRGPNGLLVYNGKGKFAIRPDKKSE-AEVRKFKHVA 184

  Fly   306 WGAGAVG-----------NAKWSGARLCDILREQGVQPDETKHVIFEGADLDPTSHPYGASIPLA 359
            ..||..|           .|..|...:|.:     :..::|:..|....:||.....:.:.:.|.
Zfish   185 MIAGGTGITPMLQLVRSITADSSDETVCSL-----IFANQTEKDILLRNELDEVHRNHPSKLKLW 244

  Fly   360 KALD 363
            ..||
Zfish   245 YTLD 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shopNP_573331.1 Cyt-b5 110..185 CDD:278597
PLN00177 199..572 CDD:177772 37/198 (19%)
eukary_SO_Moco 211..572 CDD:239029 33/186 (18%)
cyb5r2NP_001038825.1 PTZ00319 9..309 CDD:173521 38/199 (19%)
cyt_b5_reduct_like 53..309 CDD:99780 38/199 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100179
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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