DRSC/TRiP Functional Genomics Resources

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Protein Alignment shop and Cyb5r1

DIOPT Version :9

Sequence 1:NP_573331.1 Gene:shop / 32878 FlyBaseID:FBgn0030966 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_082333.1 Gene:Cyb5r1 / 72017 MGIID:1919267 Length:305 Species:Mus musculus


Alignment Length:96 Identity:19/96 - (19%)
Similarity:38/96 - (39%) Gaps:24/96 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 QPGARVKVDDDEGHITVRGYAWSGGGRKIVRVDLTNDEGVSWHVAELEQEEMPDGRHYGWSLWTA 519
            :|...|..|:|:|::.:           :::|.|   :||        ..:.|:|..  .|.:..
Mouse    96 RPYTPVTSDEDQGYVDL-----------VIKVYL---KGV--------HPKFPEGGK--MSQYLD 136

  Fly   520 RLPVSEAQRRAGDVEIWAKAVDSAYNVQPEK 550
            .|.:.:.....|...:.:.|....:|:||.|
Mouse   137 SLKIGDMVEFRGPSGLLSYAGKGNFNIQPNK 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shopNP_573331.1 Cyt-b5 110..185 CDD:278597
PLN00177 199..572 CDD:177772 19/96 (20%)
eukary_SO_Moco 211..572 CDD:239029 19/96 (20%)
Cyb5r1NP_082333.1 PTZ00319 33..305 CDD:173521 19/96 (20%)
cyt_b5_reduct_like 49..305 CDD:99780 19/96 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100179
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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