DRSC/TRiP Functional Genomics Resources

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Protein Alignment shop and Suox

DIOPT Version :9

Sequence 1:NP_573331.1 Gene:shop / 32878 FlyBaseID:FBgn0030966 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_776094.2 Gene:Suox / 211389 MGIID:2446117 Length:546 Species:Mus musculus


Alignment Length:553 Identity:257/553 - (46%)
Similarity:345/553 - (62%) Gaps:52/553 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SNGEREEQQHSQ--WSSPGSRSEQLFYAAFWAG-GLTLGYHWLTDKKNHVLLEGQKVASEEELEA 95
            |..:..|.||..  :|...||:.:........| |:.|.||           |.:..||:|    
Mouse    32 STNDSLEPQHPSLTFSDDNSRTRRWKVMGTLLGLGVVLVYH-----------EHRCRASQE---- 81

  Fly    96 TARLWHVTNRRELPTYRAEEVEQHNSVEKRIWVTYGLGVYDVTDFVENHPGG-DKILMAAGSAID 159
            :.|:           |..|:|..||:.:..:|||.|..|:|||.||:.|||| .|:::|||..::
Mouse    82 SPRM-----------YSKEDVRSHNNPKTGVWVTLGSEVFDVTKFVDLHPGGPSKLMLAAGGPLE 135

  Fly   160 PFWGIYQQHNTLEVLELLEGFRIGNLEGLVVTNVDD------ELGSPWSQEPQRHALLKPASKRP 218
            |||.:|..||...|.|||..::||.|      |.:|      |...|::.:|.||..|:..|:||
Mouse   136 PFWALYAVHNQPHVRELLAEYKIGEL------NPEDSMSPSVEASDPYADDPIRHPALRINSQRP 194

  Fly   219 FNAEPPIGLLAEQFYTPNELFYVRNHLPVPVINPEDYELEIEG--GAKDKTLTLDGIKALPKHSV 281
            ||||||..||.|.:.|||.:|:.|||||||.::|..|.|.:.|  |.:..:|:||.:...|||.|
Mouse   195 FNAEPPPELLTEGYITPNPIFFTRNHLPVPNLDPHTYRLHVVGAPGGQSLSLSLDDLHKFPKHEV 259

  Fly   282 TAAIMCGGNRRSEMTKVKAVKGLSWGAGAVGNAKWSGARLCDILREQGVQ-PDETKHVIFEGADL 345
            |..:.|.|||||||:|||.||||.|..||:..|:|:||||||:|.:.|.: .|...||.|||.|.
Mouse   260 TVTLQCAGNRRSEMSKVKEVKGLEWRTGAISTARWAGARLCDVLAQAGHRLCDSEAHVCFEGLDS 324

  Fly   346 DPTSHPYGASIPLAKALDPRGDVILAYEMNDEPLSRDHGFPIRVIVPGTVGARNVKWLTRIVVAD 410
            |||...||||||||:|:||..:|:||||||.:||.||||||:||:|||.||||:||||.|:.|..
Mouse   325 DPTGTAYGASIPLARAMDPEAEVLLAYEMNGQPLPRDHGFPVRVVVPGVVGARHVKWLGRVSVES 389

  Fly   411 KESDSHWQQNDYKGFSPSTDWDTVDFSKSDAIQAMPVTSAICTPQPGARVKVDDDEGHITVRGYA 475
            :||.||||:.||||||||.|||||:|..:.:||.:|:.|||..||.||.|    :.|.:|::|||
Mouse   390 EESYSHWQRRDYKGFSPSVDWDTVNFDLAPSIQELPIQSAITQPQDGAIV----ESGEVTIKGYA 450

  Fly   476 WSGGGRKIVRVDLTNDEGVSWHVAELEQEEMPDGRHYGWSLWTARLPVSEAQRRAGDVEIWAKAV 540
            ||||||.::|||::.|.|::|..||||.||....:.:.|.:|..:..|...|:   ::.|..|||
Mouse   451 WSGGGRAVIRVDVSVDGGLTWQEAELEGEEQCPRKAWAWRIWQLKAQVPAEQK---ELNIICKAV 512

  Fly   541 DSAYNVQPEKFEHIWNLRGVLANAYHKVKVKII 573
            |.:|||||:....||||||||:||:|:|.|:::
Mouse   513 DDSYNVQPDTVAPIWNLRGVLSNAWHRVHVQVV 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shopNP_573331.1 Cyt-b5 110..185 CDD:278597 35/75 (47%)
PLN00177 199..572 CDD:177772 201/375 (54%)
eukary_SO_Moco 211..572 CDD:239029 197/363 (54%)
SuoxNP_776094.2 Cyt-b5 85..161 CDD:278597 35/86 (41%)
Hinge. /evidence=ECO:0000250 166..175 1/8 (13%)
PLN00177 169..544 CDD:177772 202/381 (53%)
Moco domain. /evidence=ECO:0000250 176..402 127/225 (56%)
eukary_SO_Moco 186..544 CDD:239029 197/364 (54%)
Molybdopterin-binding. /evidence=ECO:0000250 216..220 1/3 (33%)
Molybdopterin-binding. /evidence=ECO:0000250 378..380 0/1 (0%)
Homodimerization. /evidence=ECO:0000250 403..539 69/142 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850567
Domainoid 1 1.000 217 1.000 Domainoid score I2687
eggNOG 1 0.900 - - E1_COG2041
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H394
Inparanoid 1 1.050 494 1.000 Inparanoid score I1382
Isobase 1 0.950 - 0 Normalized mean entropy S2171
OMA 1 1.010 - - QHG63137
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004792
OrthoInspector 1 1.000 - - oto92450
orthoMCL 1 0.900 - - OOG6_100179
Panther 1 1.100 - - LDO PTHR19372
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4400
SonicParanoid 1 1.000 - - X3942
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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