DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shop and hpo-19

DIOPT Version :9

Sequence 1:NP_573331.1 Gene:shop / 32878 FlyBaseID:FBgn0030966 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_504638.1 Gene:hpo-19 / 179029 WormBaseID:WBGene00020268 Length:309 Species:Caenorhabditis elegans


Alignment Length:128 Identity:31/128 - (24%)
Similarity:49/128 - (38%) Gaps:18/128 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 GGNRRSEMTKVKAVKGLSWGAGAVGNAKWSGARLCDILREQGVQPDET--KH--VIFEGADLDPT 348
            ||.....:..:|....::: .|..||..:.|..|..|..::..:|...  ||  :|..|..:.|.
 Worm   132 GGKMSQHLESLKIGDTINF-RGPQGNIVYKGHGLFSIKADKKAEPKNRVFKHLSMIAGGTGITPM 195

  Fly   349 SHPYGA---------SIPLAKALDPRGDVILAYEMNDEPLSRDHGFPIRVIVPGTVGARNVKW 402
            .....|         .|.|..|.....|::...|::|  |:::|  |.|..|..||....|.|
 Worm   196 LQVIAAILRDPTDTTQIRLLFANQTEDDILCRQELDD--LAKEH--PTRFRVWYTVDRPPVMW 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shopNP_573331.1 Cyt-b5 110..185 CDD:278597
PLN00177 199..572 CDD:177772 31/128 (24%)
eukary_SO_Moco 211..572 CDD:239029 31/128 (24%)
hpo-19NP_504638.1 PTZ00319 9..309 CDD:173521 31/128 (24%)
cyt_b5_reduct_like 53..309 CDD:99780 31/128 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100179
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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