DRSC/TRiP Functional Genomics Resources

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Protein Alignment htk and AT1G76510

DIOPT Version :10

Sequence 1:NP_573330.3 Gene:htk / 32877 FlyBaseID:FBgn0085451 Length:2486 Species:Drosophila melanogaster
Sequence 2:NP_001185411.1 Gene:AT1G76510 / 843984 AraportID:AT1G76510 Length:493 Species:Arabidopsis thaliana


Alignment Length:402 Identity:81/402 - (20%)
Similarity:133/402 - (33%) Gaps:97/402 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 DSSEDDDESDAKEVVNEKEENIGKVVCVETESKKKDKEKWFPALVVAPTAQATVRIRVKDEYLVR 218
            :..|.|..|..|.||.|..|       :|.:....::.|       :|..:.|......|.:|  
plant     6 EMQEQDVPSGTKGVVEEPSE-------LEKDLNSIERPK-------SPVPEDTTHTLDSDVHL-- 54

  Fly   219 SFKDGRYYTVPKKEATEFTREVASKQDVPAVQAALEFLDSSVLPAHWDRDSLFGLTNISSDDEGE 283
                   ...|.....|...||..:..|......::..:..:.......::..|.:|....|   
plant    55 -------SDAPIANQIEANEEVGGQNSVDGRNGDVDQSEKKITSDGGQEETTLGESNPLKGD--- 109

  Fly   284 IDSDSSDDEPHEEKDRFVAQLY-----KYMDDRGTPLN-------------------KVPSILSR 324
               .||...|.|...::...|.     :.:|:.|.|.:                   |.|....:
plant   110 ---PSSPHVPEESVKKWKTWLLSDAEAREVDEAGAPQDQEAFIKEVEAFNKENFLEFKAPKFYGQ 171

  Fly   325 DVDLYRLFRAVQKRGGYNRVTSQNQWKLIAMRLGFTP---CTVSVMNLVKQAYKKFLQPYGDFHR 386
            .::..:|:|||.|.|||:.||:...|:.:..  .|.|   ||.     |...::.|.:       
plant   172 PLNCLKLWRAVIKLGGYDVVTTSKLWRQVGE--SFHPPKTCTT-----VSWTFRIFYE------- 222

  Fly   387 KLGCSMLMTSRNSNRSKGRSLVRANSVASPKPMETMKTETISKLAQPNQTNVVASTSSSAAAASV 451
                       ..|...|.|...|..:...........|....|.|..:.|:..|.|..::....
plant   223 -----------KVNFIFGLSTEYALILMRLYLFSLALLEYEKHLRQNGELNLPGSASLPSSGIEK 276

  Fly   452 AASSTPARAVSTASQSAAEES--GNTSE----SSVVVEPPKKQRKGSAASSQQGKVKSL-VEKYE 509
            .|||..|.......:.||..:  |..|:    |..|.||..|: ||..::.:|..:|:: |:|  
plant   277 EASSHQASGSGRTRRDAAARAMQGWHSQRLLGSGEVTEPIVKE-KGLNSTPKQKNLKNIGVQK-- 338

  Fly   510 EKSTAVQATSSG 521
                  |.|::|
plant   339 ------QKTTTG 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htkNP_573330.3 Tudor_ARID4_rpt1 10..60 CDD:410460
Tudor_ARID4_rpt2 65..118 CDD:410461
RBB1NT 170..263 CDD:462390 13/92 (14%)
ARID 296..381 CDD:460187 23/111 (21%)
CBD_RBP1_like 698..758 CDD:350843
AT1G76510NP_001185411.1 BRIGHT 143..257 CDD:128777 25/138 (18%)
ACD_sHsps_p23-like 375..454 CDD:107219
Blue background indicates that the domain is not in the aligned region.

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