Protein Alignment htk and AT1G04880

DIOPT Version :10

• Sequence 1: NP_573330.3
• Gene: htk / 32877
• FlyBaseID: FBgn0085451
• Length: 2486
• Species: Drosophila melanogaster
• Sequence 2: NP_171980.1
• Gene: AT1G04880 / 839388
• AraportID: AT1G04880
• Length: 448
• Species: Arabidopsis thaliana
• Alignment Length: 556
• Identity: 102/556 - (18%)
• Similarity: 168/556 - (30%)
• Gaps: 201/556 - (36%)

  Fly   300 FVAQLYKYMDDRGTPLNKVPSILSRDVDLYRLFRAVQKRGGYNRVTSQNQWKLIAMRLGFTPCTV 364
            |:..|.:.....||.. .||.|..||:||::||..|..|||.|::.::.:||.:.....|.|...
plant    35 FMTSLERLHSLLGTKF-MVPIIGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTAT 98

  Fly   365 SVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSKGRSLVRANSVASPKPMETMKTET--I 427
            :...::::.|...|..|...:                     ..|:|....|..|::.....  |
plant    99 NASYVLRKYYFSLLNNYEQIY---------------------FFRSNGQIPPDSMQSPSARPCFI 142

  Fly   428 SKLAQPNQTNVVASTSSSAAAASVAASSTPARAVSTASQSAAEESGNTSESSVVVEPPKKQRKGS 492
            ....:|:|             ...|.:.||...::||...    .|:.:.|:||.....|...|.
plant   143 QGAIRPSQ-------------ELQALTFTPQPKINTAEFL----GGSLAGSNVVGVIDGKFESGY 190

  Fly   493 AASSQQGKVKSLVEKYEEKSTAVQATSSGTVAGSGASASAAAMPTTSAAASTATNLSSATSGGSA 557
            .       |...:...:.|....|.....||:......|...:|.|       .|:|:...|
plant   191 L-------VTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGVLPNT-------LNISANPQG--- 238

  Fly   558 TIATTAMNKDAESDLPLAKIKAAAVAAASTRHSMEKETNISSGSSASASSKANSAEMQRSRDASP 622
                                    ||...|:....::                .:|::| ||  |
plant   239 ------------------------VAGGVTKRRRRRK----------------KSEIKR-RD--P 260

  Fly   623 SVAAPPSAGASTSGAAATAQTASNKKEKHQRSKQADKEKDKD-------------KEEKQASSGK 674
            ....|..:|.:...|           |:|.|.|.....||:|             ::||....||
plant   261 DHPKPNRSGYNFFFA-----------EQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIYQGK 314

  Fly   675 --RKKEKISVEKIDTGDFVVGIGDKLKVNYHEKKSPSSHGSTYEAKVIE--ISVQRGVPMYLVHY 735
              ..||:...|..|               |.|||.        ..::|.  :.:|:.:|...|
plant   315 AMEDKERYRTEMED---------------YREKKK--------NGQLISNAVPLQQRLPEQNV-- 354

  Fly   736 TGWNNRYDEWVPRERIAENLTKGSKQKTRTISTSSANSGSGGGGGGGGGGGGGGGGGGGSLLVQG 800
                :..:..:|.:.:.|:..:|.            :|||.|
plant   355 ----DMAEADLPIDEVEEDDEEGD------------SSGSSG----------------------- 380

  Fly   801 SQPPGVSDKQPGKDGCSKMSPS-SGNSTGPGAPSLS 835
                   :.:|..|...:..|. ...|..|..|:|:
plant   381 -------ESEPHDDQSIETDPELEEPSLNPSGPNLN 409

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
htk	NP_573330.3	Tudor_ARID4_rpt1	10..60	CDD:410460
		Tudor_ARID4_rpt2	65..118	CDD:410461
		RBB1NT	170..263	CDD:462390
		ARID	296..381	CDD:460187	24/80 (30%)
		CBD_RBP1_like	698..758	CDD:350843	10/61 (16%)
AT1G04880	NP_171980.1	ARID_HMGB9-like	31..116	CDD:350636	24/81 (30%)
		HMG-box_AtHMGB9-like	263..329	CDD:438825	18/91 (20%)